LOCUS BC012395 1254 bp mRNA linear HUM 08-FEB-2007
DEFINITION Homo sapiens neural retina leucine zipper, mRNA (cDNA clone
MGC:9557 IMAGE:3866588), complete cds.
ACCESSION BC012395
VERSION BC012395.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1254)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1254)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: l Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54262136.
FEATURES Location/Qualifiers
source 1..1254
/db_xref="H-InvDB:HIT000035801"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9557 IMAGE:3866588"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1254
/gene="NRL"
/gene_synonym="D14S46E"
/gene_synonym="RP27"
/db_xref="GeneID:4901"
/db_xref="HGNC:HGNC:8002"
/db_xref="MIM:162080"
CDS 134..847
/gene="NRL"
/gene_synonym="D14S46E"
/gene_synonym="RP27"
/codon_start=1
/product="neural retina leucine zipper"
/protein_id="AAH12395.1"
/db_xref="GeneID:4901"
/db_xref="HGNC:HGNC:8002"
/db_xref="MIM:162080"
/translation="MALPPSPLAMEYVNDFDLMKFEVKREPSEGRPGPPTASLGSTPY
SSVPPSPTFSEPGMVGATEGTRPGLEELYWLATLQQQLGAGEALGLSPEEAMELLQGQ
GPVPVDGPHGYYPGSPEETGAQHVQLAERFSDAALVSMSVRELNRQLRGCGRDEALRL
KQRRRTLKNRGYAQACRSKRLQQRRGLEAERARLAAQLDALRAEVARLARERDLYKAR
CDRLTSSGPGSGDPSHLFL"
BASE COUNT 233 a 391 c 401 g 229 t
ORIGIN
1 gagctgagca gaggcaccag gccctgctcc atggagcctt cagtctcctg ggaagctgtg
61 cctgtctggc tctggcactg accacatcct ctcggccatt tctgaagtgc actcctccca
121 gcccagctcc agaatggccc tgccccccag ccccctggcc atggaatatg tcaatgactt
181 tgacttgatg aagtttgagg taaagcggga accctctgag ggccgacctg gcccccctac
241 agcctcactg ggctccacac cttacagctc agtgcctcct tcacccacct tcagtgaacc
301 aggcatggtg ggggcaaccg agggcacccg gccaggcctg gaggagctgt actggctggc
361 taccctgcag cagcagctgg gggctgggga ggcattgggg ctgagtcctg aagaggccat
421 ggagctgctg cagggtcagg gcccagtccc tgttgatggg ccccatggct actacccagg
481 gagcccagag gagacaggag cccagcacgt ccagctggca gagcggtttt ccgacgcggc
541 gctggtctcg atgtctgtgc gggagctaaa ccggcagctg cggggctgcg ggcgcgacga
601 ggcgctgcgg ctgaagcaga ggcgccgcac gctgaagaac cgcggctacg cgcaggcctg
661 tcgctccaag cggctgcagc agcggcgcgg gctggaggcc gagcgcgccc gcctggccgc
721 ccagctggac gcgctgcggg ccgaggtggc ccgcctggcc cgggagcgcg atctctacaa
781 ggctcgctgt gaccggctaa cctcgagcgg ccccgggtcc ggggacccct cccacctctt
841 cctctgagcc gttcagagca ccttgtggtg tagtgggggc tgggtggggt ggctccgccc
901 aggaggcggc tgcacggttc tctgcatcgt taccagagcg ccttctggtc ctagccacgc
961 cctgtatgac cgcgcaaata tccccaaagc ttttgggtcc tcaagtcatg cccgaattta
1021 gatgctggtc attttctgga gaggggtccc ctccccttac gaacacagaa acccagccca
1081 catgactagc acgctgagct ctgcagggac cagtgccagg cactgggggg tggaagtgtg
1141 gtgacacagt gaatgggagg tggaggaggg ttgcagctcc cacctcagtt tagtttttaa
1201 ttcagggttt tcaacctgta acacattaaa gctgtaatta gcaaaaaaaa aaaa
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