LOCUS BC012387 2497 bp mRNA linear HUM 24-JAN-2005
DEFINITION Homo sapiens SCY1-like 2 (S. cerevisiae), mRNA (cDNA clone
IMAGE:3882729), partial cds.
ACCESSION BC012387
VERSION BC012387.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2497)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2497)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC012387.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: p Column: 7.
FEATURES Location/Qualifiers
source 1..2497
/db_xref="H-InvDB:HIT000035797"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3882729"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2497
/gene="SCYL2"
/gene_synonym="FLJ10074"
/db_xref="GeneID:55681"
CDS <1..1520
/gene="SCYL2"
/gene_synonym="FLJ10074"
/codon_start=3
/product="SCYL2 protein"
/protein_id="AAH12387.3"
/db_xref="GeneID:55681"
/translation="ILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELC
LNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDKWFVLD
DILPFLQQIPSKEPAVLMGILGIYKCTLTHKKLGITKEQLAGKVLPHLIPLSIENNLN
LNQFNSFISVIKEMLNRLESEHKTKLEQLHIMQEQQKSLDIGNQMNVSEEMKVINIGN
QQIDKVFNNIGADLLTGSESENKEDGLQNKHKRASLTLEEKQKLAKEQEQAQKLKSQQ
PLKPQVHTPVATVKQTKDLTDTLMDNMSSLTSLSVSTPKSSASSTFTSVPSMGIGMMF
STPTDNTKRNLTNGLNANMGFQTSGFNMPVNTNQNFYSSPSTVGVTKMTLGTPPTLPN
FNALSVPPAGAKQTQQRPTDMSALNNLFGPQKPKVSMNQLSQQKPNQWLNQFVPPQGS
PTMGSSVMGTQMNVIGQSAFGMQGNPFFNPQNFAQPPTTMTNSSSASNDLKDLFG"
BASE COUNT 807 a 474 c 438 g 778 t
ORIGIN
1 agattttgtt aattttccta caaaaaatgg atttgctact aaccaaaacc cctcctgatg
61 agataaagaa cagtgttcta cccatggttt acagagcact agaagctcct tccattcaga
121 tccaggagct ctgtctaaac atcattccaa cctttgcaaa tcttatagac tacccatcca
181 tgaaaaacgc tttgatacca agaattaaaa atgcttgtct acaaacatct tcccttgcgg
241 ttcgtgtaaa ttcattagtg tgcttaggaa agattttgga atacttggat aagtggtttg
301 tacttgatga tatcctaccc ttcttacaac aaattccatc caaggaacct gcggtcctca
361 tgggaatttt aggtatttac aaatgtactc ttactcataa gaagttggga atcaccaaag
421 agcagctggc cggaaaagtg ttgcctcatc ttattcccct gagtattgaa aacaatctta
481 atcttaatca gttcaattct ttcatttccg tcataaaaga aatgcttaat agattggagt
541 ctgaacataa gactaaactg gagcaacttc atataatgca agaacagcag aaatctttgg
601 atataggaaa tcaaatgaat gtttctgagg agatgaaagt tataaatatt gggaatcagc
661 aaattgacaa agtttttaac aacattggag cagaccttct gactggcagt gagtccgaaa
721 ataaagagga cgggttacag aataaacata aaagagcatc acttacactt gaagaaaaac
781 aaaaattagc aaaagaacaa gagcaggcac agaagctgaa aagccagcag cctcttaaac
841 cccaagtgca cacacctgtt gctactgtta aacagactaa ggacttgaca gacacactga
901 tggataatat gtcatccttg accagccttt ctgttagtac ccctaaatct tctgcttcaa
961 gtactttcac ttctgttcct tccatgggca ttggtatgat gttttctaca ccaactgata
1021 atacaaagag aaatttgaca aatggcctaa atgccaatat gggctttcag acttcaggat
1081 tcaacatgcc cgttaataca aaccagaact tctacagtag tccaagcaca gttggagtga
1141 ccaagatgac tctgggaaca cctcccactt tgccaaactt caatgctttg agtgttcctc
1201 ctgctggtgc aaagcagacc caacaaagac ccacagatat gtctgccctt aataatctct
1261 ttggccctca gaaacccaaa gttagcatga accagttatc acaacagaaa ccaaatcagt
1321 ggcttaatca gtttgtacct cctcaaggtt ctccaactat gggcagttca gtaatgggga
1381 cacagatgaa cgtgatagga caatctgctt ttggtatgca gggtaatcct ttctttaacc
1441 cacagaactt tgcacagcca ccaactacta tgaccaatag cagttcagct agcaatgatt
1501 taaaagatct ttttgggtga ggtgtcttac ttctattttg aaggattatt tcagtttcaa
1561 tcatgggtga gctgatttac atctttatat agttggcttg gaggaagtac ttctatggga
1621 aagtgaacag ttctgtgaca ggaaacatct ctgtccatgc cagcatagta gttgtatgga
1681 cttctaacca gttgagtttt ttaaagcatt gaggattttt tcctcttacc aactcctctt
1741 caggttttta aagacccagc ccttcccaat ctcaaagaga aaaaggaaac tgagttatct
1801 tgaataacat aactttttaa tcaaatgttt attttggctt gtggatcttg gtgttattta
1861 aaaaattgag gtgatggtca ttgcaagctc atctattaag tactatatgg tacacagtct
1921 atgagtcatt agtcttcatt ttaatatgta aaaaatcttg atgctgtatt gatttgtttg
1981 catttaagat gacagtgaga aaatgataag cataaagaga agtatcaggt tatttgcttt
2041 ttccaaactt ttcagatgaa ctattgttta gtacagagac tgagcaaata ctacaaaatt
2101 caacttaacc ttcatttcat tggtttaaat gcgttattaa ccatcttaag tgcaaactaa
2161 tcattgtaaa ttatatttta gcatggtctg cctcaaatag taatgtattt ttctgcattc
2221 acttggatat atttagaatc acttttttcc tcctgtatca aggaagaggt atgtgctgat
2281 ttgtttggat atttgacaag gcactctgat gtgacttccc tgactactac cttcatattt
2341 catttcaaat tcaaacttct gaggttgcag catatatgaa ttgcattttc aaaagaagat
2401 ttgtaagaat taaactatat ttatgagtaa acttttgagg tttctgctgt attgtttcaa
2461 atgtaataaa ctttacttct gtaaaaaaaa aaaaaaa
//