LOCUS BC012341 1290 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 3 open reading frame 1, mRNA (cDNA clone
MGC:19908 IMAGE:4576562), complete cds.
ACCESSION BC012341
VERSION BC012341.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1290)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1290)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: i Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59710108.
FEATURES Location/Qualifiers
source 1..1290
/db_xref="H-InvDB:HIT000035765"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19908 IMAGE:4576562"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1290
/gene="C3orf1"
/gene_synonym="FLJ22597"
/db_xref="GeneID:51300"
/db_xref="HGNC:HGNC:1321"
CDS 108..965
/gene="C3orf1"
/gene_synonym="FLJ22597"
/codon_start=1
/product="chromosome 3 open reading frame 1"
/protein_id="AAH12341.1"
/db_xref="GeneID:51300"
/db_xref="HGNC:HGNC:1321"
/translation="MEVPPPAPRSFLCRALCLFPRVFAAEAVTADSEVLEERQKRLPY
VPEPYYPESGWDRLRELFGKDEQQRISKDLANICKTAATAGIIGWVYGGIPAFIHAKQ
QYIEQSQAEIYHNRFDAVQSAHRAATRGFIRYGWRWGWRTAVFVTIFNTVNTSLNVYR
NKDALSHFVIAGAVTGSLFRINVGLRGLVAGGIIGALLGTPVGGLLMAFQKYSGETVQ
ERKQKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQEDEPENDAKKIEALLNLPRNP
SVIDKQDKD"
BASE COUNT 366 a 278 c 316 g 330 t
ORIGIN
1 gtcaaatgca cggattctca cctcgtacag ttacgctctc ccgcggcacg tccgcgagga
61 cttgaagtcc tgagcgctca agtttgtccg taggtcgaga gaaggccatg gaggtgccgc
121 caccggcacc gcggagcttt ctctgtagag cattgtgcct atttccccga gtctttgctg
181 ccgaagctgt gactgccgat tcggaagtcc ttgaggagcg tcagaagcgg cttccctacg
241 tcccagagcc ctattacccg gaatctggat gggaccgcct ccgggagctg tttggcaaag
301 atgaacagca gagaatttca aaggaccttg ctaatatctg taagacggca gctacagcag
361 gcatcattgg ctgggtgtat gggggaatac cagcttttat tcatgctaaa caacaataca
421 ttgagcagag ccaggcagaa atttatcata accggtttga tgctgtgcaa tctgcacatc
481 gtgctgccac acgaggcttc attcgttatg gctggcgctg gggttggaga actgcagtgt
541 ttgtgactat attcaacaca gtgaacacta gtctgaatgt ataccgaaat aaagatgcct
601 taagccattt tgtaattgca ggagctgtca cgggaagtct ttttaggata aacgtaggcc
661 tgcgtggcct ggtggctggt ggcataattg gagccttgct gggcactcct gtaggaggcc
721 tgctgatggc atttcagaag tactctggtg agactgttca ggaaagaaaa cagaaggatc
781 gaaaggcact ccatgagcta aaactggaag agtggaaagg cagactacaa gttactgagc
841 acctccctga gaaaattgaa agtagtttac aggaagatga acctgagaat gatgctaaga
901 aaattgaagc actgctaaac cttcctagaa acccttcagt aatagataaa caagacaagg
961 actgaaagtg ctctgaactt gaaactcact ggagagctga agggagctgc catgtccgat
1021 gaatgccaac agacaggcca ctctttggtc agcctgctga caaatttaag tgctggtacc
1081 tgtggtggca gtggcttgct cttgtctttt tcttttcttt ttaactaaga atggggctgt
1141 tgtactctca ctttacttat ccttcaattt aaatacatac ttatgtttgt attaatctat
1201 caatatatgc atacatgaat atatccaccc acctagattt taagcagtaa ataaaacatt
1261 tcgcaaaaga ttaaaaaaaa aaaaaaaaaa
//