LOCUS BC012330 1948 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens basic leucine zipper transcription factor, ATF-like 2,
mRNA (cDNA clone MGC:20410 IMAGE:4638025), complete cds.
ACCESSION BC012330
VERSION BC012330.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1948)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1948)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: k Column: 8.
FEATURES Location/Qualifiers
source 1..1948
/db_xref="H-InvDB:HIT000035759"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20410 IMAGE:4638025"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1948
/gene="BATF2"
/gene_synonym="MGC20410"
/db_xref="GeneID:116071"
/db_xref="HGNC:HGNC:25163"
CDS 177..746
/gene="BATF2"
/gene_synonym="MGC20410"
/codon_start=1
/product="BATF2 protein"
/protein_id="AAH12330.1"
/db_xref="GeneID:116071"
/db_xref="HGNC:HGNC:25163"
/translation="MDCASCSAPGLLGCWDQAEGLLGPGPQGQHGCREQLELFQTPGS
CYPAQPLSPGPQPHDSPSLLQCPLPSLSLGPAVVAEPPVQLSPSPLLFASHTGSSLQG
SSSKLSALQPSLTAQTAPPQPLELEHPTRGKLGSSPDNPSSALGLARLQSREHKPALS
AATWQGLVVDPSPHPLLAFPLLSSAQVHF"
BASE COUNT 424 a 612 c 503 g 409 t
ORIGIN
1 ggagaccgga ggtctgagct gcagccacta cacaggcctg gaattctacc acagggaatt
61 tgcagcacga gtctctggaa aaagacaacc tcgccctgcg gaaggagatc cagtccctgc
121 aggccgagct ggcgtggtgg agccggaccc tgcacgtgca tgagcgcctg tgccccatgg
181 attgtgcctc ctgctcagct ccagggctcc tgggctgctg ggaccaggct gaggggctcc
241 tgggccctgg cccacaggga caacatggct gccgggagca gctggagctg ttccagaccc
301 cgggttcctg ttacccagct cagccgctct ctccaggtcc acagcctcat gattctccca
361 gcctcctcca gtgccccctg ccctcactgt cccttggccc cgctgtggtt gctgaacctc
421 ctgtccagct gtcccccagc cctctcctgt ttgcctcgca cactggttcc agcctgcagg
481 ggtcttcctc taagctcagt gccctccagc ccagcctcac ggcccaaact gcccctccac
541 agcccctcga gctggagcat cccaccagag ggaagctggg gtcctctccc gacaaccctt
601 cctctgccct ggggcttgca cgtctgcaga gcagggagca caaacctgct ctctcagcag
661 ccacttggca agggctggtt gtggatccca gccctcaccc tctcctggcc tttcctctgc
721 tctcctctgc tcaagtccac ttctaacctg gtcttcggag ctgggttggc cccttctttg
781 ggctcaggaa gcagccttag cacacgggcc tctcctccct cactactggg tgctgccctg
841 cgtggctgac cagctggccc aggatttcac agtcgaaaag gaagccacca ctgatgcctc
901 ccactgtgac aggccctgtc accaccaata tcttatttca acctcacagt tgacctgaga
961 aatcgagatt atcactccac tttttcagac aaggaaactg aggctcaggg aagccaagtg
1021 acaagtccaa ggtcacgaag actttcttgg agcccgaaac accaccctct gctcctcctt
1081 ctcctgtcct ggcccaggca tcctaggggc tgaaatcctg gaaaccgtgg gctggtgtga
1141 gaaggtttgc atgctcagag cagagaaggg ctctccccac tgcttcgtga ttccagggcc
1201 agagccatgc agtcccagaa accccaacct agctggggca ggtccagagt ccaagccctg
1261 gtgggtagag gccaagcaga agccctgaag tggactcttg cttcccctag tagtgttttc
1321 agtgccaaga agctgaaact gtgagctgga gttggggaga ggtctggaag aggaccatct
1381 gggatttcta cagcctgggt acccatagcc acaccaaggc ttctgggaga ttctgcaggg
1441 tcagctttcc aggctgttcc caaatagctc cctgcctccc cactgcccct aaagccacag
1501 cagaagagcc attcatctca taaacaaaaa ggaagaggaa agaatgagga aggaccctgt
1561 gcaaggttat ttgcaggcag ggatgggctt gtacctgaca gcacccaccc ctgtgtggcc
1621 cccaggccct catcaccctc agacccctcc taagcagttc cctcattgct ctttggacta
1681 ggctgacagc aggaagagca gggcccatga ccgggtggaa gttcagtttt ggtgtctgct
1741 tcaagagggg gttttacact ctgattccag gacaagcact ctgaggcggg tgggggagag
1801 aaaccctggc tcttcaccca ggtttcacac acatgtaaat gaaacactat gttagtatct
1861 aacacactcc tggatacaga acacaagtct tggcacatat gtgatggaaa taaagtgttt
1921 tgcaatcttt aaaaaaaaaa aaaaaaaa
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