LOCUS BC012298 2403 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 54, mRNA (cDNA clone
MGC:17614 IMAGE:3852558), complete cds.
ACCESSION BC012298
VERSION BC012298.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2403)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2403)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361494.
FEATURES Location/Qualifiers
source 1..2403
/db_xref="H-InvDB:HIT000035746"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17614 IMAGE:3852558"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2403
/gene="C11orf54"
/gene_synonym="PTD012"
/db_xref="GeneID:28970"
/db_xref="HGNC:HGNC:30204"
CDS 200..997
/gene="C11orf54"
/gene_synonym="PTD012"
/codon_start=1
/product="chromosome 11 open reading frame 54"
/protein_id="AAH12298.1"
/db_xref="GeneID:28970"
/db_xref="HGNC:HGNC:30204"
/translation="MACAEFSFHVPSLEELAGVMQKGLKDNFADVQVSVVDCPDLTKE
PFTFPVKGICGKTRIAEVGGVPYLLPLVNQKKVYDLNKIAKEIKLPGAFILGAGAGPF
QTLGFNSEFMPVIQTESEHKPPVNGSYFAHVNPADGGCLLEKYSEKCHDFQCALLANL
FASEGQPGKPAEFSSCPLNSDEEVNKWLHFYEMKAPLVCLPVFVSRDPGFDLRLEHTH
FFSRHGEGGHYHYDTTPDIVEYLGYFLPAEFLYRIDQPKETHSIGRD"
BASE COUNT 760 a 407 c 478 g 758 t
ORIGIN
1 ctgactaacg tgggcggagc tctagctcgc gtatcctgag gaggcggggt tggcctaggc
61 gaagatccgg actctgggtg ttttgctacc gtgaccgttt agaacagaaa ctgttcatac
121 ttggtgcgct gtggactctt gtgataatta accaagagta gctctatttg tccaacctca
181 cacctaaaga agaaagaaaa tggcttgtgc tgagttttct tttcatgtac caagtcttga
241 agagcttgct ggagttatgc agaaggggtt aaaagataac tttgctgatg tccaggtctc
301 tgtagttgat tgccctgatt tgactaagga accctttacc tttcctgtaa aaggcatctg
361 tgggaaaact agaattgcag aagttggagg tgtgccttac ttattgcctc ttgtaaacca
421 aaaaaaagtt tatgatctga ataaaattgc aaaagaaatc aagctgcctg gagcctttat
481 tcttggagca ggagcaggtc catttcagac tctcgggttc aattctgagt ttatgccagt
541 tattcagaca gaaagtgaac acaagcctcc tgtaaatgga agttactttg cccatgtgaa
601 ccctgcagat ggagggtgcc tactggagaa atacagtgag aaatgtcatg attttcagtg
661 tgcattactg gctaatcttt ttgccagtga aggccaacct ggcaagcctg cagaattttc
721 ttcctgcccc ttgaactctg atgaagaagt gaataaatgg ttgcattttt atgaaatgaa
781 agctcctttg gtttgtctac cagtttttgt ctccagagac ccagggtttg atttgcgact
841 ggagcacact cattttttta gtcgtcatgg agaaggtgga cactaccatt atgacactac
901 tccagatata gtggaatatc ttggatactt cttacctgca gagtttctct atcgcattga
961 tcaaccaaaa gagacgcatt caattgggcg agattaaatc agctgatact tatttagaaa
1021 aagaaataat taaggttaat taattgattg acttattaat taatactgat ataaaaccaa
1081 tagaaatgat cccacaggcc aggcacaatg gctcatgcct ataatcccag cactttggga
1141 ggctgaggca ggaagcacac tggagcccag gagtttgaga ccagcttggg caacatagca
1201 agaccctgtc tattttttta aaaaagtaaa aaatagaaat tatctcacta cttaaatccc
1261 atttttttca cttcatatga aagaacatat tgatagtata ttctatatta tttcatagat
1321 ctgtctgaaa gagattggga acaaaaatat ctaattgaga tattctttaa ttttttacat
1381 agcagcttta ttttttttat tctgtagtat cagcgaaatc agtcatgttt ataccttgaa
1441 tataaatatc aggaatcatg caattatttc tactatgtat ttagtagtat cttatatttg
1501 tataacatta ttacattttg caaattagta tcacaactgc taagtagatg tttctgagta
1561 ttagaaaaat cagtgttatt acctgcagga tattaaaaaa catttgaaaa agagaaaaag
1621 aaaaatcagt gtttagaaat gttgatagtt attgaatctt tgaattgaat tttaaaaatc
1681 cattctagta atcagagtat acttttttta tagaacaagg tggcaggtgg ggagcccttt
1741 acccttctgg tgaagttaaa ccatagaagt ttacaatttg cctttcacaa acattagcag
1801 tccgggcatg gtggctgaag cctgtgatcc cagcatgttg ggaggccgag tgggaggatt
1861 gcctgagcct aggagtttaa accagcctgg gcaccatggt gagaccccat ctctattatt
1921 taaaatgttt cttaaataaa aaaaacacaa acattagcaa ctagttggct agccataatt
1981 cctcccttgt ttcgattgcc agttagaagc aatttttatt tcactggtta tttgcaagag
2041 aaggggtaaa aaaacagcat cagagtgcaa cactgaagtg agcttacttt aatttgtaag
2101 tgaagctgtt gctgaacgtg accactatcg ttgctgaaat ataaaattat actcactgat
2161 tgtaatggtt gaaattttcc tgaataatca ttagccaaag atcaactctc taatggtgct
2221 aatggcaatc tagctaatgt gcaaatttag gaagtcttca gtactaagta cataattttc
2281 aaataatatt ttttaattgt ctactttgga tgttagctat gtcttgtgag tataaattcc
2341 aattttaagc actattttga tgcaaaaaaa tgaataaaaa atttaattta aaaaaaaaaa
2401 aaa
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