LOCUS BC012225 1992 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens synaptonemal complex protein 2-like, mRNA (cDNA clone
IMAGE:3452587), partial cds.
ACCESSION BC012225
VERSION BC012225.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1992)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1992)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: k Column: 21.
FEATURES Location/Qualifiers
source 1..1992
/db_xref="H-InvDB:HIT000087810"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3452587"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1992
/gene="SYCP2L"
/gene_synonym="dJ62D2.1"
/gene_synonym="NO145"
/db_xref="GeneID:221711"
/db_xref="HGNC:HGNC:21537"
CDS <1..1632
/gene="SYCP2L"
/gene_synonym="dJ62D2.1"
/gene_synonym="NO145"
/codon_start=1
/product="SYCP2L protein"
/protein_id="AAH12225.1"
/db_xref="GeneID:221711"
/db_xref="HGNC:HGNC:21537"
/translation="EFETDSIRFLNHLNNRLGDQRRVYSFPCIAAFADEHEMRKPADE
KLEKFWIDFNLGSQSVTFYIDNAENTLWDSVTLPKEAVMNFSITETEKIKIFIIYLKK
PMIISYKEVMKIEIHFDLQFNISQVSIQALGEDKQMLPDQTKISSELFSKSDKEDRES
PSGLERETEQAEESTNMVEFMSAEDDRCLITLHLNDQSEPPVIGEPASDSHLQPVPPF
GVPDFPQQPKSHYRKHLFSESNQDSSTSELSWTSNQKKKSLKSYSSRKKTRTRSNLRI
LPVFPPSSGSGHEKDQAKLLSPSEKEIPEQNNTTSPKTSEQKFQDSFAFLTAEDSAQK
TELQDPHSLSELSSLKHSEDEEKPKIVNQESLTESTSLKHKLRNLEDKDIPEGSFAKS
QQSRLEEEVASGSPFSITEERELPEGISTSSLEVVPENLNGSAILPTFENFTKKRKRK
YELRYRKRPFNSENAKKAPDCLIKLLNQMQLFRLNKLERFQNLVLQELSSLKQDIQAL
EHLEKEVLEFWGKQSADLQSFCDLQVLRFNSTQTS"
BASE COUNT 672 a 394 c 405 g 521 t
ORIGIN
1 gaatttgaga cggacagtat tcgttttctc aatcacctaa acaacagact tggtgaccaa
61 agaagggtgt attcatttcc gtgtattgct gcttttgctg atgagcatga gatgagaaaa
121 ccagcggatg aaaaattaga gaaattttgg atcgacttca acctaggaag tcagagtgtc
181 actttttata tagacaatgc tgagaatact ctatgggact cagtgacact tccgaaggaa
241 gcggtgatga atttcagcat aacagaaacg gagaagataa agatatttat catttacctg
301 aagaagccca tgattatcag ctacaaagaa gtcatgaaaa tagaaatcca ttttgatttg
361 cagttcaaca tatcacaagt ttccattcaa gctttaggag aagacaaaca gatgttgcct
421 gaccagacga aaatctcctc agaacttttt agtaagtctg ataaagaaga cagggagagt
481 cccagtggcc ttgaaagaga aacagagcag gcagaagaat ccactaacat ggtggagttt
541 atgagtgctg aagatgaccg ctgcctaata actctccact taaatgacca atctgagcca
601 cctgttattg gggaacctgc ctctgatagt caccttcagc cggtccctcc gttcggggtc
661 cctgacttcc cgcaacaacc taagtctcat tacagaaaac atctcttctc tgagagtaat
721 caagattcaa gtaccagtga actatcttgg accagtaacc agaaaaagaa atccctaaaa
781 tcatattcca gtagaaagaa gacaagaacc agaagtaatt tgagaatctt gccagttttc
841 cctcccagta gtggcagtgg ccatgagaaa gaccaagcta agcttctatc accatcagag
901 aaagaaatac ccgagcaaaa taacaccaca tctccaaaga cttctgaaca aaaattccaa
961 gatagttttg cttttttgac tgctgaagat tctgcccaga aaacagagct tcaagatcct
1021 cactcactga gtgagctctc ttccttgaag cactcagaag atgaagaaaa acctaagatt
1081 gtgaaccaag aatcactaac agaaagtact agcttgaaac ataagctgag aaacttggaa
1141 gacaaagaca taccagaagg tagttttgct aagtcacaac aatcaagatt ggaagaagag
1201 gttgcttcgg gatccccttt ctcaataaca gaagaaagag agttgccaga aggaatttcc
1261 acttcatccc tagaagttgt gccagagaac ttgaacggtt ctgccattct cccaaccttt
1321 gaaaacttca ctaaaaaacg gaaaagaaaa tatgagctta ggtacagaaa gcgtccgttt
1381 aattcagaaa atgcaaagaa agcaccggat tgcctaataa aacttttaaa ccagatgcaa
1441 ctgttcagac tcaataaact agagcgcttt caaaatttgg ttcttcaaga gttgagcagt
1501 cttaagcagg atattcaggc cctggaacac cttgagaagg aggttctgga attctggggg
1561 aaacagtctg ctgatctgca atctttctgt gatctgcaag tgctgaggtt caattcaact
1621 cagacttcat aagaaagcca aagcctggtt ttatgattgc agccctcagc ctgggctgcc
1681 tgaagacgaa gagaaagagc aaggttattg ttggctcagg ccttgttagc cagacttcgt
1741 gctctgtacg cattcaattt cctcccctcc aaacatcatc cctgggaact gctgagttca
1801 gatagaatat atgttggtag tttgcagttg ggttattatc catttgttca taaaaattaa
1861 ccttttgtat taaaatttgg tcagatagta ttaatagaaa gttcaggatg ttaaacaact
1921 tggagtggtg ttgctttttt tttttataaa agtaaaatgg actttttttt gtttgaaaaa
1981 aaaaaaaaaa aa
//