LOCUS BC012144 1166 bp mRNA linear HUM 24-FEB-2004
DEFINITION Homo sapiens zinc finger protein 561, mRNA (cDNA clone
IMAGE:4661170), partial cds.
ACCESSION BC012144
VERSION BC012144.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1166)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1166)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC012144.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: p Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22748660.
FEATURES Location/Qualifiers
source 1..1166
/db_xref="H-InvDB:HIT000087794"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4661170"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>1166
/gene="ZNF561"
/gene_synonym="MGC45408"
/db_xref="GeneID:93134"
CDS 334..>1166
/gene="ZNF561"
/gene_synonym="MGC45408"
/codon_start=1
/product="ZNF561 protein"
/protein_id="AAH12144.1"
/db_xref="GeneID:93134"
/translation="MLENYMNLASVEWEIQPRTKRSSLQQGFLKNQIFSGIQMTRGYS
GWKLCDCKNCGEVFREQFCLKTHMRVQNGGNTSEGNCYGKDTLSVHKEASTGQELSKF
NPCGKVFTLTPGLAVHLEVLNARQPYKCKECGKGFKYFASLDNHMGIHTDEKLCEFQE
YGRAVTASSHLKQCVAVHTGKKSKKTKKCGKSFTNFSQLYAPVKTHKGEKSFECKECG
RSFRNSSCLNDHIQIHTGIKPHKCTYCGKAFTRSTQLTEHVRTHTGIKPYECKKKKKK
K"
misc_feature 370..549
/gene="ZNF561"
/gene_synonym="MGC45408"
/note="EH; Region: Eps15 homology domain"
/db_xref="CDD:smart00027"
BASE COUNT 398 a 221 c 257 g 290 t
ORIGIN
1 gaccgcaaat aaccctgtac aaagaggaat ggagattgcc tctatccacc tagattcata
61 agctggcctg aggtgatctt ggcatcaagg aagggatgca catcatcaca ccatcagctt
121 cagagaatgg cagccattta tttgtcccgt gggttttttt ccagggaacc aatctgccct
181 tttgaagaaa agacaaaggt agaaaggatg gtggaggact acctggcaag tggttatcag
241 gattcagtga cgtttgatga tgtggctgtg gacttcaccc cagaggagtg ggctttactg
301 gacacaactg agaaatacct ctacagagat gtgatgctgg agaactacat gaacctggcc
361 tctgtggaat gggaaataca acctagaacc aaacggtcat cacttcagca gggttttttg
421 aagaatcaaa tattcagtgg gatacaaatg acaagaggct acagtggatg gaaactctgt
481 gactgtaaga attgtggaga ggtcttcagg gaacagtttt gccttaagac acacatgaga
541 gttcagaatg gagggaatac ttctgagggt aattgttatg gaaaagacac cctcagtgtg
601 cacaaggaag cctctactgg acaggaactt tccaaattta atccatgtgg aaaagtcttt
661 actctaactc caggtcttgc tgtacatctt gaagttctca atgcaagaca accctacaaa
721 tgtaaggaat gtggaaaagg ctttaagtat tttgcaagcc ttgataatca tatgggaatc
781 cacactgatg agaaactctg tgaatttcag gaatatggga gagctgtcac agcttcttca
841 cacctaaagc agtgtgtagc agttcataca ggaaagaaat ccaaaaagac taagaaatgt
901 gggaaatcct tcactaattt ttctcaactt tatgcacctg tgaaaactca taaaggagag
961 aagtcctttg aatgtaaaga atgtggaaga tcctttagaa attcctcatg ccttaatgat
1021 cacattcaaa ttcacactgg aataaaacca cacaagtgta catactgtgg gaaagccttc
1081 actagatcaa ctcaacttac tgaacatgta agaactcaca ctggaataaa accctatgaa
1141 tgtaaaaaaa aaaaaaaaaa aaaaaa
//