LOCUS BC012120 1563 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens nuclear factor I/C (CCAAT-binding transcription factor), mRNA (cDNA clone MGC:20153 IMAGE:4554661), complete cds. ACCESSION BC012120 VERSION BC012120.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1563) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1563) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: c Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 45505148. FEATURES Location/Qualifiers source 1..1563 /db_xref="H-InvDB:HIT000035674" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20153 IMAGE:4554661" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_46" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1563 /gene="NFIC" /gene_synonym="CTF" /gene_synonym="CTF5" /gene_synonym="MGC20153" /gene_synonym="NF-I" /db_xref="GeneID:4782" /db_xref="HGNC:HGNC:7786" /db_xref="MIM:600729" CDS 63..1349 /gene="NFIC" /gene_synonym="CTF" /gene_synonym="CTF5" /gene_synonym="MGC20153" /gene_synonym="NF-I" /codon_start=1 /product="nuclear factor I/C (CCAAT-binding transcription factor)" /protein_id="AAH12120.1" /db_xref="GeneID:4782" /db_xref="HGNC:HGNC:7786" /db_xref="MIM:600729" /translation="MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKK HEKRMSKDEERAVKDELLGEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKAP GCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHP VLCVQPHHIGVAVKELDLYLAYFVRERDAEQSGSPRTGMGSDQEDSKPITLDTTDFQE SFVTSGVFSVTELIQVSRTPVVTGTGPNFSLGELQGHLAYDLNPASTGLRRTLPSTSS SGSKRHKSGSMEEDVDTSPGGDYYTSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSP FNSPSPQDSPRLSSFTQHHRPVIAVHSGIARSPHPSSALHFPTTSILPQTASTYFPHT AIRYPPHLNPQDPLKDLVSLACDPASQQPGPSWYLG" BASE COUNT 352 a 540 c 440 g 231 t ORIGIN 1 aatgactcag taagttcagc gcgcccgctc cggccggccc tgcgcctccc gccgcgcccg 61 ggatgtattc gtccccgctc tgcctcaccc aggatgagtt ccacccgttc atcgaggccc 121 tgctgcctca cgtccgcgcc ttcgcctaca cctggttcaa cctgcaggcg cggaagcgca 181 agtacttcaa gaagcacgag aagcggatgt cgaaggacga ggagcgtgcg gtcaaggacg 241 agctgctggg cgagaagccc gaggtcaagc agaagtgggc gtcgcggctg ctggccaagc 301 tgcgcaagga catccggccc gagtgccgcg aggacttcgt gctgagcatc accggcaaga 361 aggcgccggg ctgcgtgctc tccaaccccg accagaaggg caagatgcgg cgcatcgact 421 gtctccggca ggcggacaag gtgtggcggc tggacctggt catggtcatc ctgttcaagg 481 gcatcccgct ggagagcacc gacggcgagc gcctggtcaa ggctgcgcag tgcggtcacc 541 cggtcctgtg cgtgcagccg caccacattg gcgtggccgt caaggagctg gacctctacc 601 tggcctactt cgtgcgtgag cgagatgcag agcaaagcgg cagtccccgg acagggatgg 661 gctctgacca ggaggacagc aagcccatca cgctggacac gaccgacttc caggagagct 721 ttgtcacctc cggcgtgttc agcgtcactg agctcatcca agtgtcccgg acacccgtgg 781 tgactggaac aggacccaac ttctccctgg gggagctgca ggggcacctg gcatacgacc 841 tgaacccagc cagcactggc ctcagaagaa cgctgcccag cacctcctcc agtgggagca 901 agcggcacaa atcgggctcg atggaggaag acgtggacac gagccctggc ggcgattact 961 acacttcgcc cagctcgccc acgagtagca gccgcaactg gacggaggac atggaaggag 1021 gcatctcgtc cccggtgaag aagacagaga tggacaagtc accattcaac agcccgtccc 1081 cccaggactc tccccgcctc tccagcttca cccagcacca ccggcccgtc atcgccgtgc 1141 acagcgggat cgcccggagc ccacacccgt cctccgctct gcatttccct acgacgtcca 1201 tcctacccca gacggcctcc acctacttcc cccacacggc catccgctac ccacctcatc 1261 tcaaccccca ggacccgctc aaagatcttg tctcgctggc ctgcgaccca gccagccagc 1321 aacctggacc gtcctggtat ctgggatagc aaaggtcttc ttccctcgcc ccttctccat 1381 cgtcccagga atcccagggg gcagcacagc cggcccccgg cccacgtttt cggtggaaaa 1441 ttagagtgaa caagaacacc cctgccgact cccagcccgg ccaaaaagac aaaacacata 1501 gacgcacaca ctcaggagga aaagaaaaaa caaaggcaga agaagaaaaa aaaaaaaaaa 1561 aaa //