LOCUS BC012108 1227 bp mRNA linear HUM 18-DEC-2008
DEFINITION Homo sapiens carbonic anhydrase XIV (CA14) pseudogene, mRNA (cDNA
clone IMAGE:4643256).
ACCESSION BC012108
VERSION BC012108.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1227)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1227)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: l Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction.
FEATURES Location/Qualifiers
source 1..1227
/db_xref="H-InvDB:HIT000035665"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4643256"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 308 a 309 c 304 g 306 t
ORIGIN
1 ataccccaca cagtctccag gcgggaagag gacttccttc ttcgtgatca atatttgcgt
61 agcactttgc aagtgttttc gggttcatca ttgcatacaa ccagaggagg aaaagaaaag
121 caactggatc cccttccgcc acctccaggt ctcctaaagg aagaagtcct tgggaaccca
181 tactgtgtga tccagggtcc ttcactggcc tctccctcag gtcatccagt tgtcaatttg
241 ttgctttggc ttagtttcac cattagcagt actcttcttg gacacaacct ccagagtaaa
301 agcaaatgcc ggatgcggtg gctcacacct gtaatcccag cactttggga ggcggaggtg
361 ggtggattgc ctgagctcag gagttccaga ccagcctgga caacatggtg gactttccag
421 aaaatatgta gctacccagc tacacctgca ctggggtcag gatgatcccc agggggctca
481 gaacaccaga tcaacagtga agccacagtt gccgagctcc acatcatacg ttatggctgt
541 gattcctgtg atagcttgag tgaggccgct cagaggcctc agggcctgac tgtcctgggc
601 atcctaattg aggtgaaatg ctgagccttg gtgtaggaat cttggttggc tctctctgac
661 ttctgctggc cattttcttc atggctagaa ggcttcagaa caagaggctg gaaaatcaga
721 agagcgtggt catcacctca gcatgagcca ccactgaggc ataaactccc tcttagatac
781 cttggatatg gatgccttcc cctcgtgcct ccagaggtgc tttcccctca tgtctcacca
841 cccctcaggg aacctctaaa atggggtgca gggactggcc ggaattactg taggagtagt
901 aggcgcttct cctctggaca tcccctgcag agaggtatgg acccaggctc tcattcaagg
961 aagaacagca gagccttcag cccctcaaaa catgtaggag gagatcaggg catccctgtg
1021 ttgttagtgc agaggacaaa ctgtgtttag ttttagggga agtttgggat gtaccccaaa
1081 gtcctccacc atctcacctt tatgtccctt tccctagata tattgcagga tctcccctta
1141 ggagaaagag ttgctgttgg ggttatatat ttttgctcaa catatttgga aactaaagtt
1201 tctggaggaa aaaaaaaaaa aaaaaaa
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