LOCUS BC012094 789 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB GTPase activating protein 1-like, mRNA (cDNA clone
IMAGE:4661946), complete cds.
ACCESSION BC012094
VERSION BC012094.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 789)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 789)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: p Column: 9
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..789
/db_xref="H-InvDB:HIT000035653"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4661946"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..789
/gene="RABGAP1L"
/gene_synonym="EVI5"
/gene_synonym="HHL"
/gene_synonym="RP1-102G20.1"
/gene_synonym="TBC1D18"
/db_xref="GeneID:9910"
/db_xref="HGNC:HGNC:24663"
/db_xref="MIM:609238"
CDS 272..490
/gene="RABGAP1L"
/gene_synonym="EVI5"
/gene_synonym="HHL"
/gene_synonym="RP1-102G20.1"
/gene_synonym="TBC1D18"
/codon_start=1
/product="RAB GTPase activating protein 1-like"
/protein_id="AAH12094.1"
/db_xref="GeneID:9910"
/db_xref="HGNC:HGNC:24663"
/db_xref="MIM:609238"
/translation="MMEEISIMVAYDAHVFSQLHDEDFLTSLVAISKPRSMVPTKKLK
KYEKEYQTMRESQLQQEDPMDRYKFVYL"
BASE COUNT 283 a 131 c 185 g 190 t
ORIGIN
1 ggaagctctg agtcactgaa tagcaaagaa aaatatgaaa gcaagaggaa ttgctttcac
61 atctagaaaa tgttgcaaga taatctgaaa tcttctggtg ctggtgaatg catgaagagg
121 ttcacagtat cttttaaagt acttctgaaa agataaggag tttaaaaggt gggtgtgtac
181 actggcactg agctgcagta ggatttttcc ttggatagtc tggtctggag ctgggacagc
241 agctgctgct gtggaaaggc cagctggcaa gatgatggaa gaaatctcca ttatggtagc
301 ctatgacgcc catgttttca gccagctgca cgatgaagac ttcctcacta gtctggtggc
361 catcagcaag cccaggtcta tggtaccaac caagaagctg aagaaatatg agaaagaata
421 tcagacaatg cgagagagtc agctgcaaca ggaagaccca atggatagat acaagtttgt
481 atatttgtag gtaactccag ctgttgcatt tatactggga atcttcataa gaagctgaga
541 gaaagagagg ggaaaaagaa agtggctttc tactttcaaa aatgaaacaa aaaggaaaaa
601 tggcaaagta ctgttttagc tgtgcatgtc atatccacaa agacttttag caggtgaact
661 gttccaagac tgacacaagg atgtttcaaa cttgcctctg tctgtagaaa atgttaaaaa
721 taccaactca cttggaagga aaaataaaaa tcacaaaggt atattgagca caaaaaaaaa
781 aaaaaaaaa
//