LOCUS BC012093 4826 bp mRNA linear HUM 06-JAN-2006
DEFINITION Homo sapiens zinc finger, MYM-type 4, mRNA (cDNA clone
IMAGE:4650448), partial cds.
ACCESSION BC012093
VERSION BC012093.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4826)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4826)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: n Column: 1.
FEATURES Location/Qualifiers
source 1..4826
/db_xref="H-InvDB:HIT000035652"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4650448"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..4826
/gene="ZMYM4"
/gene_synonym="CDIR"
/gene_synonym="KIAA0425"
/gene_synonym="MYM"
/gene_synonym="ZNF198L3"
/db_xref="GeneID:9202"
/db_xref="HGNC:HGNC:13055"
/db_xref="IMGT/GENE-DB:13055"
/db_xref="MIM:13055"
CDS <1..4306
/gene="ZMYM4"
/gene_synonym="CDIR"
/gene_synonym="KIAA0425"
/gene_synonym="MYM"
/gene_synonym="ZNF198L3"
/codon_start=2
/product="ZMYM4 protein"
/protein_id="AAH12093.2"
/db_xref="GeneID:9202"
/db_xref="HGNC:HGNC:13055"
/db_xref="IMGT/GENE-DB:13055"
/db_xref="MIM:13055"
/translation="RRVTQHESDNENEIQIQNKLKKDFPKQFDQVSVFKSIRKDFSLV
RENSKETFSGKEKNRDLTYEREKRLDKPHKDLDSRLKSSFFDKAANQVEETLHTHLPQ
TPETNFRDSSYPFANKESIGSELGNSFASNIRIKEEPLDDEYDKAMAPQQGLLDKIKD
EPDNAQEYSHGQQQKTQEGELKISAVFSVSGSPLAPQLTTGFQPSLASSGMNKMLPSV
PATAVRVSCSGCKKILQKGQTAYQRKGSTQLFCSTLCLTGYTVPPARPPPPLTKKTCS
SCSKDILNPKDVISAQFENTTTSKDFCSQSCLSTYELKKKPIVTINTNSISTKCSMCQ
KNAVIRHEVNYQNVVHKLCSDACFSKFRSANNLTMNCCENCGGYCYSGSGQCHMLQIE
GQSKKFCSSSCITAYKQKSAKITPCALCKSLRSSAEMIENTNSLGKTELFCSVNCLSA
YRVKMVTSAGVQVQCNSCKTSAIPQYHLAMSDGSIRNFCSYSCVVAFQNLFNKPTGMN
SSVVPLSQGQVIVSIPTGSTVSAGGGSTSAVSPTSISSSAAAGLQRLAAQSQHVGFAR
SVVKLKCQHCNRLFATKPELLDYKGKMFQFCGKNCSDEYKKINNVMAMCEYCKIEKIV
KETVRFSGADKSFCSEGCKLLYKHDLAKRWGNHCKMCSYCLQTSPKLVQNNLGGKVEE
FCCEECMSKYTVLFYQMAKCDACKRQGKLSESLKWRGEMKHFCNLLCILMFCNQQSVC
DPPSQNNAANISMVQAASAGPPSLRKDSTPVIANVVSLASAPAAQPTVNSNSVLQGAV
PTVTAKIIGDASTQTDALKLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQNKECQT
EDTPSQPQIIVVPVPVPVFVPIPLHLYTQYAPVPFGIPVPMPVPMLIPSSMDSEDKVT
ESIEDIKEKLPTHPFEADLLEMAEMIAEDEEKKTLSQGESQTSEHELFLDTKIFEKDQ
GSTYSGDLESEAVSTPHSWEEELNHYALKSNAVQEADSELKQFSKGETEQDLEADFPS
DSFDPLNKGQGIQARSRTRRRHRDGFPQPRRRGRKKSIVAVEPRSLIQGAFQGCSVSG
MTLKYMYGVNAWKNWVQWKNAKEEQGDLKCGGVEQASSSPRSDPLGSTQDHALSQESS
EPGCRVRSIKLKEDILSCTFAELSLGLCQFIQEVRRPNGEKYDPDSILYLCLGIQQYL
FENGRIDNIFTEPYSRFMIELTKLLKIWEPTILPNGYMFSRIEEEHLWECKQLGAYSP
IVLLNTLLFFNTKYFQLKNVTEHLKLSFAHVMRRTRTLKYSTKMTYLRFFPPLQKQES
EPDKLTVGKRKRNEDDEVPVGVEMAENTDNPLRCPVRLYEFYLSKCSESVKQRNDVFY
LQPERSCVPNSPMWYSTFPIDPGTLDTMLTRILMVREVHEELAKAKSEDSDVELSD"
BASE COUNT 1544 a 997 c 1024 g 1261 t
ORIGIN
1 gagaagagtc acacagcatg aatcagacaa tgaaaatgaa atacaaattc aaaataagtt
61 aaaaaaagac tttcctaaac aatttgatca ggtttctgtc tttaaatcaa tacggaaaga
121 ttttagtcta gtaagagaaa acagcaaaga gacattttct ggaaaggaga aaaatagaga
181 cctaacttat gaacgtgaaa aacggttgga taaaccccat aaagatttgg attcaaggtt
241 gaaaagcagt ttttttgata aagcagctaa tcaagttgaa gaaacattac atacccattt
301 accacaaacc ccagaaacaa actttaggga ttccagctac ccatttgcca ataaagaatc
361 cattggttcg gaactgggga attcctttgc atcaaatatt agaattaaag aagaaccttt
421 ggatgatgag tatgacaaag caatggcacc acagcaggga ctactagaca aaataaaaga
481 tgaacctgac aatgctcaag agtatagtca tggccaacag caaaaaactc aagaggggga
541 actgaaaatt agtgctgtgt tttcagtcag tggcagccct cttgctccac agttgactac
601 tggctttcag ccctcactgg cgtcatctgg catgaataaa atgcttcctt cagttccagc
661 cacagctgtt cgagtttcct gttctggttg taaaaaaatc ctccagaagg ggcaaactgc
721 ttatcagagg aaagggtcta ctcagctatt ctgctccaca ctgtgcctca ctggatatac
781 agttccacct gcccgcccac cgcctcctct caccaagaaa acttgttcaa gttgctcaaa
841 agacatttta aatccaaagg atgtgatcag tgcccagttt gaaaacacca ccactagtaa
901 agatttttgc agtcagtcat gtttgtcaac atatgaactg aaaaaaaaac ctattgttac
961 cataaataca aatagtattt caaccaaatg cagcatgtgt cagaagaatg ctgttattcg
1021 acatgaagtt aattaccaga atgtggtcca taaactttgc agtgatgcct gcttctctaa
1081 gtttcgttct gctaacaacc tcaccatgaa ctgttgtgag aactgtgggg gttactgtta
1141 cagtgggtcg ggacaatgcc acatgcttca gatagaggga cagtctaaga agttttgtag
1201 ttcatcgtgt atcacggcat acaagcagaa atcagccaaa attacaccgt gtgcgctttg
1261 caaatcattg agatcctcag cagaaatgat tgaaaatacc aatagcttgg ggaagacaga
1321 gcttttctgt tctgttaatt gcttatctgc ttacagagtt aaaatggtta cttctgcagg
1381 tgtacaagtt cagtgtaaca gttgtaaaac ctcagcaatt cctcagtatc acctagccat
1441 gtcagatgga agtatacgca acttctgcag ctacagctgt gtggtagctt tccagaattt
1501 attcaacaaa ccaactggaa tgaattcttc agtagtgccc ttgtctcagg gccaagtaat
1561 tgtaagcatc cccacaggtt ccacagtgtc agccggagga ggtagcacat ctgctgtttc
1621 tcccacctcc atcagtagct ctgctgcagc tggtctccag cgtctcgctg cccagtccca
1681 gcatgttggg tttgcacgaa gtgttgtgaa actcaaatgt caacactgta accgtctttt
1741 tgccacaaaa ccagaacttc ttgactataa gggcaaaatg tttcagttct gtggcaagaa
1801 ttgttctgat gaatataaga aaataaataa tgtaatggca atgtgtgaat attgtaaaat
1861 tgagaaaatt gtaaaggaga ctgttcggtt ctcaggtgct gacaagtcat tctgtagtga
1921 aggttgcaaa ttgctttata aacatgactt ggcaaaacgc tggggaaatc actgtaaaat
1981 gtgcagttat tgtttacaga catctcccaa attggtacag aataatttag gagggaaagt
2041 ggaagagttc tgttgtgaag aatgcatgtc caaatataca gttttgttct atcagatggc
2101 caaatgtgat gcttgtaagc gacagggtaa actcagtgag tccttgaaat ggcgagggga
2161 aatgaaacat ttctgtaacc tgctttgtat cttgatgttc tgtaatcagc aaagtgtatg
2221 tgacccgcct tcacaaaata atgcagcaaa tatttccatg gttcaagctg cttcagcagg
2281 acccccatct ctgagaaaag attcgactcc agttatagcc aatgtagtat cattggcaag
2341 tgcccctgct gctcagccta cagtgaattc taacagtgtc ttacaaggtg cagttccaac
2401 agtaacagcg aaaatcatcg gtgatgcaag tactcaaaca gatgccctga aactgccacc
2461 ttcccaacct ccaaggcttt tgaagaacaa agctttatta tgcaaaccca tcacacagac
2521 taaagccacc tcttgcaaac cacataccca aaacaaagaa tgccagacag aagacactcc
2581 aagtcagccc cagattattg tggtgccagt tcccgtacca gtgtttgttc ccatacctct
2641 tcacctttat actcaatatg ctccagtccc atttggaatt ccagttccaa tgcctgtccc
2701 tatgcttatt ccatcttcaa tggatagtga agataaagtc acagagagta ttgaagacat
2761 taaagaaaag cttcccacac atccatttga agctgatctc cttgagatgg cagaaatgat
2821 tgcagaagat gaagagaaga agactctatc tcagggagag tcccaaactt ctgaacacga
2881 actctttcta gacaccaaga tatttgaaaa agaccaagga agtacataca gtggtgatct
2941 tgaatcagag gcagtatcta ctccacatag ctgggaggaa gagctgaatc actatgcctt
3001 aaagtcaaat gctgtgcaag aggctgattc agaattgaag cagttctcaa aaggggaaac
3061 tgaacaggac ctggaagcag attttccatc agactccttt gacccactta ataaaggaca
3121 gggaatccag gcacgttccc gaacaagacg acgacacaga gatggcttcc cccaacccag
3181 acgaagagga cggaagaagt ctatagtggc tgtggagccc aggagtctta ttcaaggagc
3241 ctttcaaggc tgctcagtgt ccgggatgac actgaaatac atgtatgggg taaatgcttg
3301 gaagaactgg gttcagtgga aaaatgccaa ggaagagcag ggggatctaa aatgtggagg
3361 ggttgaacag gcctcatcta gcccacgttc tgacccctta ggaagtactc aagaccatgc
3421 actctctcaa gaatcctcag agccaggctg tagagtccgc tctatcaagc tgaaggaaga
3481 cattctgtcc tgcacttttg ctgagttgag tttgggctta tgccagttta tccaagaggt
3541 gcggagacca aatggtgaaa aatatgatcc agacagtatc ttatacttgt gccttggaat
3601 tcaacagtac ctgtttgaaa atggtagaat agataacatt tttactgagc cctattccag
3661 atttatgatt gaacttacca aactcttgaa aatatgggaa cctacaatac ttcctaatgg
3721 ttacatgttc tctcgcattg aggaagagca tttgtgggag tgcaaacagc tgggcgctta
3781 ctcaccaatc gtccttttaa acaccctcct tttcttcaat accaaatact tccaactaaa
3841 gaatgttact gagcacttga agctttcctt tgcccatgtg atgagacgga ccaggactct
3901 gaagtacagt accaagatga catatctgag gttcttccca cctttacaga agcaggagtc
3961 agaaccagat aaactgactg ttggcaagag gaaacgaaat gaagatgatg aggttccagt
4021 gggggtggag atggcagaga atactgacaa tccactaaga tgcccagtcc gactttatga
4081 gttttacctg tcaaaatgtt ctgaaagtgt gaagcaaagg aatgatgtgt tttaccttca
4141 acctgagcgc tcctgtgtcc cgaatagccc catgtggtac tccacattcc cgatagaccc
4201 tggaaccctg gacaccatgt taacacgtat tctcatggtg agggaggtac atgaagaact
4261 tgccaaagcc aaatctgaag actctgatgt tgaattatca gattaaaacg gaagtgaggt
4321 tcttattttc atacatattg gtatgcacca aactgtgaat gcatccagct gttggaaaat
4381 gatgtataag tctaagtcct cttgacttga ccataagatc atggaaaaca gatgacttgt
4441 gaaccccaca gtgtggatgt gcaaatgaaa attgaaggaa agaatatgaa ctgagaaatg
4501 ttctttggca gtgatatagt tcttagacat cttcagaatg actaatttct ccgagtggtg
4561 cataatctta ttttgtttgg gagtaacaaa tcgtggaata tttttaagga aaactgttgt
4621 ataaaacttt accatagtaa ccttagacct tagagaggta gctttggagt gaaactttgg
4681 ctgcaatagg ctactttggc aagccctccg taaaagtcag aggagagatc agtacagagc
4741 taagagtgac atcaaatgag gactgtggga cccagatttg aagacccaat aaaaatactc
4801 aactttttaa aaaaaaaaaa aaaaaa
//