LOCUS BC012092 2650 bp mRNA linear HTC 15-FEB-2005
DEFINITION Homo sapiens ST3 beta-galactoside alpha-2,3-sialyltransferase 6,
mRNA (cDNA clone IMAGE:4651744), with apparent retained intron.
ACCESSION BC012092
VERSION BC012092.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2650)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2650)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: o Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31377787
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2650
/db_xref="H-InvDB:HIT000087783"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4651744"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 871 a 456 c 556 g 767 t
ORIGIN
1 ggcgagggcg cgcggctggt gtccgccccg cccgaaaggt gagccagcca tgagagggta
61 tcttgtggcc atattcctga gtgctgtctt cctctattat gtactgcatt gcatattatg
121 gggaacgaat gtctattggg tggcacctgt ggaaatgaaa cggagaaata agatccagcc
181 ttgtttatca aagccagctt ttgcctctct gctgagtcag agctctgcat atattttaag
241 aaaaggcatt gaggaactca atcaaaccag tattcttttc acacaggttt catcagtttc
301 acccttttct gtgtgcggct gattttagaa agattgcttc cttgtatggt agcgataagt
361 ttgatttgcc ctatgggatg agaacatcag cggaatattt tcgacttgct ctttcaaaac
421 tgcagagttg tgatctcttt gatgagtttg acaacatacc ctgtaaaaag tgtgtggtgg
481 ttggtaatgg aggagttttg aagaataaga cattaggaga aaaaatcgac tcctatgatg
541 taataataag aatgaataat ggtcctgttt taggacatga agaagaagtt gggagaagga
601 caaccttccg actttttcca gaatctgttt tttcagatcc tattcacaat gaccctaata
661 cgacagtgat tctcactgct tttaagccac atgatttaag gtggctgttg gaattgttga
721 tgggtgacaa aataaacact aatggttttt ggaagaaacc agccttaaac ctgatttata
781 aaccttatca aatccgaata ttagatcctt tcattatcag aacagcagct tatgaactgc
841 ttcattttcc aaaagtgttt cccaaaaatc agaaacctaa acacccaaca acaggaatta
901 ttgccatcac attggcgttt tacatatgtc acgaagttca cctagctggt tttaaataca
961 acttttctga cctcaagagt cctttgcact actatgggaa tgccaccatg tctttgatga
1021 ataagaacgc gtatcacaat gtgactgcag agcagctctt tttgaaggac attatagaaa
1081 aaaacctcgt aatcaacttg actcaagatt gactctacag actcagaaga tgatgctaac
1141 agtgttagtt ttatttttgt actgcaattt ttagtttaaa atatgttgga tgcactcgtc
1201 aaataattat gtatactgtc tgttgctgcc tggtgattca taaccaccag cttaatttct
1261 gtgaatactg tatatttaac ttatgaaaac caagaaatgt aaagataaca ggaaaataag
1321 ttttgattgc aatgttttta aaataagcta gttttctgag gtgttttcac acgtcttttt
1381 atagttactt catcttagat ttttgaaggg atatgacttc ctactaagga tttagtttac
1441 cacaacaatt ctgactacaa taagacattt tgaggaggat atttggctac tgtaaacatg
1501 gctggtggaa aatcacgatt gtggcttgat gtggcaagcc gaaaccactt ggctctggaa
1561 atctaagttc atactggttt aattaagctc tctcctgaca acccccagaa ttaaatgaac
1621 catgattgtg aagagtaatt tggtacaatg aaggcagtgt ttgtttttaa gttaaaggaa
1681 atgggctaaa cataaagttc ttattagata agtaaataac taaagaaaga atacaattac
1741 taaactctga tggctttgta ttattttaaa gaaatgaagt ttaactaact ttatacaatg
1801 aagctaagct aggcaagctc aagaaggaaa aaaaaatctt gaacattatt tttttttgcc
1861 tgacttactt attcattaaa ttttgaaggt tttccacttg aagtaaatta ggaaaggtaa
1921 agaagataac agaacaagta aacacttaag aaaagtcaag ctgaggccgg gcagggtggc
1981 tcacacctgt aatcctaaca aacactttgg gaggccgagg gaggcagctg gattgcctga
2041 actcaggagt tcaagaccag cctggccaac atggtgaaac ctcatctcta ctaaaataca
2101 aaataattag ctgggcgtgg tggtatgcgc tgtagtccca ggtactcggg aggctgaggc
2161 acgagaattg cttgagcccg ggaggcagag gttgcagtga gccaagatcg cgccactgca
2221 cttcagcctg ggtgacagag tgaggctgtc ttctaaaaaa tataaaaagt gaagttggga
2281 tttttggatt taaatggtac aaaaagaata tctcattttc ccatgattaa agctaatctt
2341 cagatggaaa gcttgcctgg ctacctaggg tgcaccagag aatctgatcc aatgcaagcc
2401 agtcaatcct acaaatgtgg tgagctagtc ttccttccta tattttaata aatgtaaccc
2461 aaggccatct ggaggtaggg gaatgagagg tgaagaaaca gaaaaataga ggttataagg
2521 atggaactaa aagttgtcag aagaggtatg agctgaagaa agaattactc tcttttgacc
2581 aataaatacc attgggaaac actggaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2641 aaaaaaaaaa
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