LOCUS BC012076 1511 bp mRNA linear HTC 24-JUL-2006
DEFINITION Homo sapiens tRNA 5-methylaminomethyl-2-thiouridylate
methyltransferase, mRNA (cDNA clone IMAGE:4650215), with apparent
retained intron.
ACCESSION BC012076
VERSION BC012076.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1511)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1511)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56699398
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1511
/db_xref="H-InvDB:HIT000087780"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4650215"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 359 a 377 c 473 g 302 t
ORIGIN
1 cggatgcagg ccttgcggca cgtcgtgtgc gccctgtccg gcggcgtgga cagcgccgtg
61 gccgcgctgc tgctgaggcg gagaggttac caggtgacag gggtgtttat gaagaactgg
121 gactcactgg atgaacatgg ggtctgtact gccgacaaag actgtgaaga tgcttacaga
181 gtttgccaga tcttagacat ccctttccat caagtgtcct acgtaaagga gtattggaat
241 gatgtgttca ggggcagatg ccattgccac aggtcactat gcaagaactt ccctggaaga
301 tgaagaagtc tttgagcaga agcacgttaa gaagcccgaa gggcttttca gaaatcggtt
361 tgaagttaga aatgcggtaa aactcctcca ggcagctgac agctttaaag accagacctt
421 ctttctcagc caggtttccc aggatgccct gaggagaacc atcttccctc tggggggatt
481 aacgaaagag tttgtaaaga aaatcgctgc tgagaataga cttcatcatg tgcttcagaa
541 gaaagagagc atgggcatgt gtttcatcgg gaagaggaat tttgaacatt tccttcttca
601 gtatctgcag cctcgacctg gtcactttat ttccatagaa gacaataagg ttctgggaac
661 acataaaggt tggttcctgt ataccttggg ccagagagca aacataggtg gcctgagaga
721 gccctggtac gtggtggaga aggacagcgt caagggtgac gtgtttgtgg ccccccggac
781 agaccaccca gccctgtaca gggacctgct gaggaccagc cgcgtgcact ggattgcgga
841 ggagcctccc gcagcactgg tccgggacaa gatgatggag tgccacttcc gattccgcca
901 ccagatggca ctagtgccct gtgtgctgac cctcaatcaa gatggcaccg tgtgggtgac
961 agctgtgcag gctgtgcgtg cccttgccac aggacagttt gctgtgttct acaaggggga
1021 cgagtgcctg ggcagcggga agatcctgcg gctggggccg tctgcctaca cgctccagaa
1081 gggccagcgc agagctggga tggccactga gagccccagt gacagcccag aagatggtcc
1141 aggcctgagt cccttgctct gacagagatg gatctgctag aaggaacctg gagagcagga
1201 cccatggctg ggcggctggt gagcagtcca ggtgcccaag ggccagcttg ctgctgccca
1261 aagcagagga agccgggctg gctgagggtc cgaaaagcct gcaggggccc ggcgagcccc
1321 aggaagagcc tcagctccag gctggggctc tggctgctgg agcatctgct ggctggtggg
1381 gtggcccgag ttccccttca ccgcccccag ggagggtttc ccacctcaga gtacaccaag
1441 gggacctgca gagggggctg tcgggacagc gtggaataaa cattatttca aggaaaaaaa
1501 aaaaaaaaaa a
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