LOCUS       BC012072                3189 bp    mRNA    linear   HUM 04-OCT-2003
DEFINITION  Homo sapiens checkpoint with forkhead and ring finger domains, mRNA
            (cDNA clone MGC:19963 IMAGE:4650348), complete cds.
ACCESSION   BC012072
VERSION     BC012072.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3189)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3189)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-AUG-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
            Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
            Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
            Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
            Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
            Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
            Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
            George Yang, Scott Zuyderduyn, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 29 Row: n Column: 3
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 8922674.
FEATURES             Location/Qualifiers
     source          1..3189
                     /db_xref="H-InvDB:HIT000035636"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:19963 IMAGE:4650348"
                     /tissue_type="Placenta, choriocarcinoma"
                     /clone_lib="NIH_MGC_21"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..3189
                     /gene="CHFR"
                     /gene_synonym="FLJ10796"
                     /gene_synonym="RNF116"
                     /db_xref="GeneID:55743"
                     /db_xref="MIM:605209"
     CDS             9..1967
                     /gene="CHFR"
                     /gene_synonym="FLJ10796"
                     /gene_synonym="RNF116"
                     /codon_start=1
                     /product="CHFR protein"
                     /protein_id="AAH12072.1"
                     /db_xref="GeneID:55743"
                     /db_xref="MIM:605209"
                     /translation="MERPEEGKQSPPPQPWGRLLRLGAEEGEPHVLLRKREWTIGRRR
                     GCDLSFPSNKLVSGDHCRIVVDEKSGQVTLEDTSTSGTVINKLKVVKKQTCPLQTGDV
                     IYLVYRKNEPEHNVAYLYESLSEKQGMTQESFDTSGAGAGRGADPRVPPSSPATQVCF
                     EEPQPSTSTSDLFPTASASSTEPSPAGRERSSSCGSGGGGISPKGSGPSVASDEVSSF
                     ASALPDRKTASFSSLEPQDQEDLEPVKKKMRGDGDLDLNGQLLVAQPRRNAQTVHEDV
                     RAAAGKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPV
                     ERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFSDEEGS
                     SEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPGAPQALGDAPS
                     TSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRVEREQDPRVAPQQCAVCLQPFCHL
                     YWGCTRTGCYGCLAPFCELNLGDKCLDGVLNNNSYESDILKNYLATRGLTWKNMLTES
                     LVALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELTYQYRQNIPASELPVAVTSRPDCY
                     WGRNCRTQVKAHHAMKFNHICEQTRFKN"
     misc_feature    120..317
                     /gene="CHFR"
                     /gene_synonym="FLJ10796"
                     /gene_synonym="RNF116"
                     /note="FHA; Region: FHA domain. The FHA
                     (Forkhead-associated) domain is a phosphopeptide binding
                     motif"
                     /db_xref="CDD:pfam00498"
     misc_feature    879..1010
                     /gene="CHFR"
                     /gene_synonym="FLJ10796"
                     /gene_synonym="RNF116"
                     /note="HRD1; Region: COG5243, HRD1, HRD ubiquitin ligase
                     complex, ER membrane component [Posttranslational
                     modification, protein turnover, chaperones]"
                     /db_xref="CDD:COG5243"
BASE COUNT          763 a          846 c          871 g          709 t
ORIGIN      
        1 gaatcccgat ggagcggccc gaggaaggca agcagtcgcc gccgccgcag ccctggggac
       61 ggctcctgcg tctgggcgcg gaggagggcg agccgcacgt cctcctgagg aagcgggagt
      121 ggaccatcgg gcggagacga ggttgcgacc tttccttccc cagcaataaa ctggtctctg
      181 gagatcactg tagaattgta gtggatgaaa aatcaggtca ggtgacactg gaagatacca
      241 gcaccagtgg aacagtgatt aacaagctga aggttgttaa gaagcagaca tgccctttac
      301 agactgggga tgtcatctac ttggtgtaca ggaagaatga accggaacac aacgtggcat
      361 acctctatga atctttaagt gaaaagcaag gcatgacaca agaatccttt gatacctcag
      421 gtgcaggtgc agggcgaggg gccgatcccc gggtccctcc gtcgtcgccc gccactcagg
      481 tgtgctttga ggaaccacag ccatcaacat cgacgtcaga cctcttcccc acagcctcgg
      541 cctcttccac ggagccttct cctgcagggc gagagcgttc ctccagttgt gggtctgggg
      601 gtggtggcat ctcccctaaa ggaagtggtc cctctgtggc aagtgatgaa gtctccagct
      661 ttgcctcagc tctcccagac agaaagactg cgtccttttc gtcgttggaa ccccaggatc
      721 aggaggattt ggagcccgtg aagaagaaaa tgagaggaga tggggacctt gacctgaacg
      781 ggcagttgtt ggtcgcacaa ccgcgtagaa atgcccaaac cgtccacgag gacgtcagag
      841 cagcggctgg gaagccagac aagatggagg agacgctgac atgcatcatc tgccaggacc
      901 tgctgcacga ctgcgtgagt ttgcagccct gcatgcacac gttctgcgcg gcttgctact
      961 cgggctggat ggagcgctcg tccctgtgtc ctacctgccg ctgtcccgtg gagcggatct
     1021 gtaaaaacca catcctcaac aacctcgtgg aagcatacct catccagcat ccagacaaga
     1081 gtcgcagtga agaagatgtg caaagtatgg atgccaggaa taaaatcact caagacatgc
     1141 tgcagcccaa agtcaggcgg tctttttctg atgaagaagg gagttcagag gacctgctgg
     1201 agctgtcaga cgttgacagt gagtcctcag acattagcca gccatacgtc gtgtgccggc
     1261 agtgtcctga gtacagaagg caggcggcgc agcctcccca ctgcccagca cccgagggcg
     1321 agccaggagc cccacaggcc ctgggggatg caccctccac gtccgtcagc ctgacgacag
     1381 cagtccagga ttacgtgtgc cctctgcaag gaagccacgc cctgtgcacc tgctgcttcc
     1441 agcccatgcc cgaccggaga gtggagcgcg agcaggaccc gcgtgtcgcc cctcagcagt
     1501 gtgcggtctg cctgcagcct ttctgccacc tgtactgggg ctgcacccgg accggctgct
     1561 acggctgcct ggccccgttt tgtgagctca acctgggtga caagtgtctg gacggcgtgc
     1621 tgaacaacaa cagctacgag tcagacatcc tgaagaatta cctggcaacc agaggtttga
     1681 catggaaaaa catgttgacc gagagcctcg tggctctcca gcggggagtg tttctgctgt
     1741 ctgattacag agtcacggga gacaccgttc tgtgttactg ctgtggcctg cgcagcttcc
     1801 gtgagctgac ctatcagtat cggcagaaca ttcctgcttc cgagttgcca gtggccgtaa
     1861 catcccgtcc tgactgctac tggggccgta actgccgcac tcaggtgaaa gctcaccacg
     1921 ccatgaaatt caatcatatc tgtgaacaga caaggttcaa aaactaagca tccagaggcc
     1981 ctgagcagct ttcagcactg gaggtgaaga gagcgtgttt ttaaaataca gagacaagca
     2041 cgtcaaggtg ttttcacagc cccctgaggg aagggacgca gggtctccga caggtgctct
     2101 ggggtgactc ttctgtggag ctttttaccc tctgagtgag accctcccca gagccccggg
     2161 ggccgcagcc cgccctcctg gtgagcgctg ggcagggctc atggtggcat cagcagcaga
     2221 gacgaagcct ttctgtaaca tgcggccgtc ccgccgagag gggcagtttt gctcttttgt
     2281 acattttccg aaactacagt taaagcagaa gtctgttttc aggaaaagtt tcaagggaga
     2341 agggcaagtt tatcaaaaac attgtttcag gagaagggag cataagttta cagcctacag
     2401 gacgtacaca atatcctgct gctgggaaaa ccacagcatt ttatctattt tttattttaa
     2461 taggtttggt gcttatcttc taataagatt taaatgtcac aaactgtagc acaaataata
     2521 taatttataa tttacaaatt gactaaaatt gggtatagta tggtatttga aagaataagc
     2581 atatgcttct gtttattaaa aaaagaaacc ttccaatgtc caaaactgct aaccctcgac
     2641 gtggccgcca agttagtcgc tccttgctaa ccggtgagtg accgcggccc cgagcctggg
     2701 gctggacgca ggtcccagga catgctgctc ccttgtgtga gtgaccacgg ccccgagcct
     2761 ggggctggac gcaggtccca ggacgtgctg ctcccttgtg tgagtgacca cggccccaag
     2821 cccggggctg gaggcaggtc ccaggacgcg ccgctccctc atgctgcccg ggcccttcct
     2881 ccaagaccct acagagcctg aggggcacct tggcttccgc ctgtgctagc tttgccatgt
     2941 catctggaat aatacttgaa attttgattt ttggaaaaaa aagtttttta tcttttgttg
     3001 aaatcacctg ttatccttgt ttgtaaactg ataacttttt tgcttcttct caggaataca
     3061 gttttcaact gttgtcttgc tcttgataga aactgagaag cagcaatctg tatttgtgga
     3121 ggaaagtcct ctcttttgca tattctaata aatgagccgc gtttgctcct caaaaaaaaa
     3181 aaaaaaaaa
//