LOCUS BC012069 3652 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens nudix (nucleoside diphosphate linked moiety X)-type
motif 4, mRNA (cDNA clone MGC:19931 IMAGE:4650281), complete cds.
ACCESSION BC012069
VERSION BC012069.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3652)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3652)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40317633.
FEATURES Location/Qualifiers
source 1..3652
/db_xref="H-InvDB:HIT000035634"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19931 IMAGE:4650281"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3652
/gene="NUDT4"
/gene_synonym="DIPP2"
/gene_synonym="DIPP2alpha"
/gene_synonym="DIPP2beta"
/gene_synonym="HDCMB47P"
/gene_synonym="KIAA0487"
/db_xref="GeneID:11163"
/db_xref="HGNC:HGNC:8051"
/db_xref="MIM:609229"
CDS 191..736
/gene="NUDT4"
/gene_synonym="DIPP2"
/gene_synonym="DIPP2alpha"
/gene_synonym="DIPP2beta"
/gene_synonym="HDCMB47P"
/gene_synonym="KIAA0487"
/codon_start=1
/product="nudix (nucleoside diphosphate linked moiety
X)-type motif 4"
/protein_id="AAH12069.1"
/db_xref="GeneID:11163"
/db_xref="HGNC:HGNC:8051"
/db_xref="MIM:609229"
/translation="MMKFKPNQTRTYDREGFKKRAACLCFRSEQEDEVLLVSSSRYPD
QWIVPGGGMEPEEEPGGAAVREVYEEAGVKGKLGRLLGIFEQNQDRKHRTYVYVLTVT
EILEDWEDSVNIGRKREWFKVEDAIKVLQCHKPVHAEYLEKLKLGCSPANGNSTVPSL
PDNNALFVTAAQTSGLPSSVR"
BASE COUNT 1065 a 730 c 754 g 1103 t
ORIGIN
1 gtcccgcccg cgtcggagcg gccgccggcc ccgggactga ccggcctcgc cgcacctccc
61 gcaccgacta gcgctcccgg gcgctcctgc gcccgactcg ccctcgcccc cactccccgg
121 cggggtggcg gcggccgggc ccccacggcg gcggccggag cagcagcagc agcagcagga
181 gcccgcctct atgatgaagt tcaagcccaa ccagacgcgg acctacgacc gcgagggctt
241 caagaagcgg gcggcgtgcc tgtgcttccg gagcgagcag gaggacgagg tgctgctggt
301 gagtagcagc cggtacccag accagtggat tgtcccagga ggaggaatgg aacccgagga
361 ggaacctggc ggtgctgccg tgagggaagt ttatgaggag gctggagtca aaggaaaact
421 aggcagactt ctgggcatat ttgagcagaa ccaagaccga aagcacagaa catatgttta
481 tgttctaaca gtcactgaaa tattagaaga ttgggaagat tctgttaata ttggaaggaa
541 gagagagtgg ttcaaagtag aagatgctat caaagttctc cagtgtcata aacctgtaca
601 tgcagagtat ctggaaaagc taaagctggg ttgttcccca gccaatggaa attctacagt
661 cccttccctt ccggataata atgccttgtt tgtaaccgct gcacagacct ctgggttgcc
721 atctagtgta agatagagag aactgggtag gcctctccca ccatgtgcag tctcatgggg
781 agaggcttct ttcgtttcct cgtcaaacat ctgattgacg cttgcaaact gtctgaattt
841 gccatgcaag gttttcaaac aatttgcatg tttttcagat gctttcaaat ctttttttaa
901 aaaaatagtg taaaatattt taataagcca aagccatgtg gaatttttgt ttagatgcct
961 taactgtgcc acaccccaca accccctata ttattttggt tgtctatttc tcacagcata
1021 ttttcagttt tttgtccatt tgacatcagt ctgtggttta ttttgtcatc agattacttg
1081 tgggtatacc taccccaaaa ttgttttctc attcacagca ttagcatatt cagcaaatcc
1141 atctgtggtg ggaattaaaa atattattgg tattaaagaa atccattcac cccaaaactt
1201 gttttacagg attacaattt taattcaaaa tttccagatt tgggctattt ctgtatgatc
1261 caataactta ttttgtcaca gggcttaatt tgccattttt ggggatttgt cgactcattt
1321 tgtctgaatt ttcacaactg gtattatgtc actagctacc tgatacggct atttccctta
1381 taactcaata gtaccttaac acaaagtata actctgtaga gttggtgaat attttaggga
1441 aatattagca aaatgcatgt agtaaagaca tcttatgaaa actgtattca tggaattgat
1501 ttagcatgct cagttgccag ttcccattat cgatactctt tctttgcaga ataccttaga
1561 accgttattt ccctcagtgt agattgctct taaaatgtat tcagttattt agtggccccc
1621 acaggagtgg agtcttgaaa tctaattcta aatgccagtc agtgatgatc gcatcacagt
1681 tgagtgaaat ggccttcctg ttcagctgtt agagactgaa gattgttagg gcaccttaga
1741 atgtctcatc ttttctaggt tgtcaacagg tactatttgt cacataacta actttcgagg
1801 cactggaaca tacctgaact aagaattaaa tcttttactt tatactcact taaaatcaag
1861 aatcccatct aaaacacata ggtaccttat ctgaaactct tgcacttccc caaccagggc
1921 agaaatgagg tgggagaagt ttgactaaaa tgagggatgg gggaaagtaa aagatgtttt
1981 tttttttttg agactcgctt tgtcacccag gctggagtgc aatggcacaa tctcaactca
2041 ccgcaacctc cgcctcccgg gttcaagcga ttctcctgcc tcagcctccc gagtagttgg
2101 gattacaggc gcctgcctcc atgcctggct aattttgtat ttttagtaga gacagggttt
2161 cttcatgttg gtcaggctgg tctcaaactc ctaacctcgt gatccgcctg cctcgacctc
2221 ccaaagtgct gggattacag gcatgagcca ccatgcccag ccaaagatca tttttttata
2281 tagacttcag ccctttgtaa atattgtaac tggggagtat agagtagaaa aaaagtatag
2341 ttaaaacatt tgttctacaa attaaccttt aaaaatataa ttactgctaa aaatagagtg
2401 ctgttacact taaggaaaat tagtgccatt ttggaaatga gatcttgtgc cataaataca
2461 gctgaactga atataaatgt tcacaaatta atgctgtcaa aggaatgagt aaagcagaaa
2521 aacttttaac cagcaacatt tcaagtacgt agtgtgatca aacatgatca tccagaattt
2581 ttatattttt ttctttgtac agaggttaca tattctgggt gttcttttat aaaggaaaca
2641 ttttaaatcc cacaaattga cactttctat cttcaatgga ctaagatttt tttggtcagt
2701 aatctctgaa atttccttaa attatatact taacatagca gagaaactgg attgtttttg
2761 tatataagac tgcttccacc tgaaatgctg tcataagtac tgggggggtg ggggagtgcc
2821 catcttgtac atgatattct tagaggtaat aaggtaatga tgcatgaatt tattttataa
2881 actcttggac tatgtatttg acatgtaaaa tatgtacagt attaacgtca accatctctt
2941 taaagttagc ctataaatat tgttgtataa ttttctttgg tcagaaacac ttggactgaa
3001 tagtgacact cggtaaggat tttcagtgcc atttagcaaa acgtctttag tctatgcaac
3061 tagcaaaaat ctgcataatg caacaacaca gttttcacac ttcaaatttt acatgagggg
3121 ttcttcacga ttctcctgga acccagtcta gcaaaatgag aggaaaggcc ctagggagat
3181 ttatttctgt taaatagtta actctgctga gtatgacaaa tagtgtctac tatctcaacc
3241 ctccaaaatt tgcagagtgt tgggactgtc atttgtgatt tttttttttt tttttggtgg
3301 ggtagttgaa taaaattggg cagctaaatt tttcagttcc atgtgcctcc caaataaaaa
3361 acagaaaata agtagttttt gtgaattgac ttgcagacaa agtagaaact gtgctgcatg
3421 atgttatttt gtaaacagat gacattttct gaccaggcac atgccatcca attttctgtc
3481 aatcacactg ttgtataaag cagcagaact gaaggggaaa aatgattgtt gtatacactg
3541 aattgctttg catggtctca tttgagataa ttgatgtaag aatcctgact tttttatatt
3601 tggaaacatc aaataaaaat ggaaaaaatg aaaaaaaaaa aaaaaaaaaa aa
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