LOCUS BC012063 1742 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens retinoid X receptor, gamma, mRNA (cDNA clone MGC:19909 IMAGE:4635470), complete cds. ACCESSION BC012063 VERSION BC012063.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1742) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1742) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: j Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58331205. FEATURES Location/Qualifiers source 1..1742 /db_xref="H-InvDB:HIT000035630" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19909 IMAGE:4635470" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1742 /gene="RXRG" /gene_synonym="NR2B3" /gene_synonym="RXRC" /db_xref="GeneID:6258" /db_xref="HGNC:HGNC:10479" /db_xref="MIM:180247" CDS 189..1580 /gene="RXRG" /gene_synonym="NR2B3" /gene_synonym="RXRC" /codon_start=1 /product="retinoid X receptor, gamma" /protein_id="AAH12063.1" /db_xref="GeneID:6258" /db_xref="HGNC:HGNC:10479" /db_xref="MIM:180247" /translation="MYGNYSHFMKFPAGYGGSPGHTGSTSMSPSAALSTGKPMDSHPS YTDTPVSAPRTLSAVGTPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNV VNSVSSSEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCK GFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRE RAESEAECATSGHEDMPVERILEAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQ LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVH RSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVET LREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDT FLMEMLETPLQIT" BASE COUNT 439 a 501 c 436 g 366 t ORIGIN 1 ctccgatcta gaggcagatt cctgactaat cccagagggc tggcccagcc tgtgctcccc 61 gggctgctag gaagcgatga ccactcttgt tagcccaagt tgaagaaagc cgggctgtgc 121 ctgggagccg agagaggcgg taatatttag aagctgcaca ggagaggaac atgaactgac 181 gagtaaacat gtatggaaat tattctcact tcatgaagtt tcccgcaggc tatggaggct 241 cccctggcca cactggctct acatccatga gcccatcagc agccttgtcc acagggaagc 301 caatggacag ccaccccagc tacacagata ccccagtgag tgccccacgg actctgagtg 361 cagtggggac ccccctcaat gccctgggct ctccatatcg agtcatcacc tctgccatgg 421 gcccaccctc aggagcactt gcagcgcctc caggaatcaa cttggttgcc ccacccagct 481 ctcagctaaa tgtggtcaac agtgtcagca gttcagagga catcaagccc ttaccagggc 541 ttcccgggat tggaaacatg aactacccat ccaccagccc cggatctctg gttaaacaca 601 tctgtgccat ctgtggagac agatcctcag gaaagcacta cggggtatac agttgtgaag 661 gctgcaaagg gttcttcaag aggacgataa ggaaggacct catctacacg tgtcgggata 721 ataaagactg cctcattgac aagcgtcagc gcaaccgctg ccagtactgt cgctatcaga 781 agtgccttgt catgggcatg aagagggaag ctgtgcaaga agaaagacag aggagccgag 841 agcgagctga gagtgaggca gaatgtgcta ccagtggtca tgaagacatg cctgtggaga 901 ggattctaga agctgaactt gctgttgaac caaagacaga atcctatggt gacatgaata 961 tggagaactc gacaaatgac cctgttacca acatatgtca tgctgctgac aagcagcttt 1021 tcaccctcgt tgaatgggcc aagcgtattc cccacttctc tgacctcacc ttggaggacc 1081 aggtcatttt gcttcgggca gggtggaatg aattgctgat tgcctctttc tcccaccgct 1141 cagtttccgt gcaggatggc atccttctgg ccacgggttt acatgtccac cggagcagtg 1201 cccacagtgc tggggtcggc tccatctttg acagagtcct aactgagctg gtttccaaaa 1261 tgaaagacat gcagatggac aagtcggaac tgggatgcct gcgagccatt gtactcttta 1321 acccagatgc caagggcctg tccaacccct ctgaggtgga gactctgcga gagaaggttt 1381 atgccaccct tgaggcctac accaagcaga agtatccgga acagccaggc aggtttgcca 1441 agctgctgct gcgcctccca gctctgcgtt ccattggctt gaaatgcctg gagcacctct 1501 tcttcttcaa gctcatcggg gacaccccca ttgacacctt cctcatggag atgttggaga 1561 ccccgctgca gatcacctga gccccaccag ccacagcctc cccacccagg atgacccctg 1621 ggcaggtgtg tgtggacccc caccctgcac tttcctccac ctcccaccct gacccccttc 1681 ctgtccccaa aatgtgatgc ttataataaa gaaaaccttt ctacaaaaaa aaaaaaaaaa 1741 aa //