LOCUS BC012007 1556 bp mRNA linear HTC 17-FEB-2006
DEFINITION Homo sapiens chromosome 5 open reading frame 21, mRNA (cDNA clone
IMAGE:4539013), with apparent retained intron.
ACCESSION BC012007
VERSION BC012007.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1556)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1556)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: k Column: 10
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1556
/db_xref="H-InvDB:HIT000087760"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4539013"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 461 a 305 c 290 g 500 t
ORIGIN
1 atttctagat gagtgcaact gtcaaagcaa tatgggttca ctggtcgtgc ttcctgcggg
61 ctgagcgcgg gctgagcgct gccagtcagc gctcacatta aggctgacag cgccctgcct
121 ggctcggccg gcgaagctct aattgccctg aaggagaccg cgcgggcgct gcgggtccgg
181 cggcgtcggc gcggtcctag cgcccgccgt agcggagccg ctgctgcttc cccctcctta
241 atcatgtcca tctttccccg ctctcaactg gagcaaactt ctattccaga cttcagattt
301 ccattttcac taggtttttc cctgagggca tcttattacc cacctctttt tttttttttt
361 tttaaggaag ttccacacac actccaaagc cgatttcaaa ttcagaacct gaatgccatg
421 atgtaccatg tagtttgggg aatgcaaatt gttctctccc tgttttcatt tcgggaccag
481 aaaaaaaaaa caactctgca taaaaatcta taaagtactg aatccgcatt actgctgaaa
541 atccttttgc cagctaattg tgagagttta cacaagtctc tgatttcaga agagactgtt
601 aaaaccaaaa caatgatggg cagctctttt aagtgtaggt gtgaaggtcc cattttcaat
661 ggaatttcca actgttatca ctgggattga ctttactttt taaacacata atgtgtactg
721 tgtggcattg taatttagat ataacacact taagttttgc tttttaaatc tctctgtgga
781 gaaaggttgt tgttaatcct ttccagaatg atctattctg agctttcctg gagttaggcc
841 cttctaggga gagaattttt ttattgtcat caggaaacga aacctttgtg ctctgcagcc
901 tttttcttct gaaaggctaa gtggggctaa aattatcctt ttagttttct gctttaacaa
961 gaagagaagg acttggtgtg aaagaatttc ttctctcagt ccaatggtat aatttttagc
1021 actccgcttc ctctgtaggg tttagcccta cagtttgaac aattatttta atccagctaa
1081 gatgtggcca acactgtgaa atacaggaga tgttaaggtt ttgctgactt ttagattaaa
1141 atcttaaaat ttcacattat attttaatta cttgaaaagt ttaattacct agtaaagatt
1201 gtttctaata gatgagaaca taaatttaat agttttcatc cttttttaaa gtgtgtgcaa
1261 caattaatat gcctgcctta tttgaggaca tgataaaatg tacccaaaat gacttcgaac
1321 tgtctaatgc ctcagaaaag taacttaaaa tcaaccactt cgtgcttaaa tgtttttata
1381 ttatgaaccg atttcaacaa gttttaaagc tgttaatatc tcattgctgt gtttgacata
1441 caagtacatt cattggttct atagtcttaa tgatgacaaa ttaaagatgt tttttcagtg
1501 ctcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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