LOCUS BC011996 1390 bp mRNA linear HUM 04-DEC-2007
DEFINITION Homo sapiens calcium binding tyrosine-(Y)-phosphorylation
regulated, mRNA (cDNA clone MGC:9117 IMAGE:3859043), complete cds.
ACCESSION BC011996
VERSION BC011996.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1390)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1390)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: d Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24797107.
FEATURES Location/Qualifiers
source 1..1390
/db_xref="H-InvDB:HIT000035592"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9117 IMAGE:3859043"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1390
/gene="CABYR"
/gene_synonym="CBP86"
/gene_synonym="FSP-2"
/db_xref="GeneID:26256"
/db_xref="HGNC:HGNC:15569"
CDS 153..1292
/gene="CABYR"
/gene_synonym="CBP86"
/gene_synonym="FSP-2"
/codon_start=1
/product="calcium binding tyrosine-(Y)-phosphorylation
regulated"
/protein_id="AAH11996.1"
/db_xref="GeneID:26256"
/db_xref="HGNC:HGNC:15569"
/translation="MISSKPRLVVPYGLKTLLEGISRAVLKTNPSNINQFAAAYFQEL
TMYRGNTTMDIKDLVKQFHQIKVEKWSEGTTPQKKLECLKEPGKTSVESKVPTQMEKS
TDTDEDNVTRTEYSDKTTQFPSVYAVPGTEQTEAVGGLSSKPATPKTTTPPSSPPPTA
VSPEFAYVPADPAQLAAQMLAMATSERGQPPPCSNMWTLYCLTDKNQQGHPSPPPAPG
PFPQATLYLPNPKDPQFQQHPPKVTFPTYVMGDTKKTSAPPFILVGSNVQEAQGWKPL
PGHAVVSQSDVLRYVAMQVPIAVPADEKYQKHTLSPQNANPPSGQDVPRPKSPVFLSV
AFPVEDVAKKSSGSGDKCAPFGSYGIAGEVTVTTAHKRRKAETEN"
BASE COUNT 438 a 357 c 286 g 309 t
ORIGIN
1 tgcggagctt cgtgatgcac gccccgatgc ctgcggggct ataaaaacgc tcgcaagcgc
61 caagtctcct caggagccgc cggcaagggg gcaacgagga agctcttaag agcgcggccg
121 gaaagcagtt gagttacaga catcctgcca aaatgatttc ttcaaagccc agacttgtcg
181 taccctatgg cctcaagact ctgctcgagg gaattagcag agctgttctc aaaaccaacc
241 catcaaacat caaccagttt gcagcagctt attttcaaga acttactatg tatagaggga
301 atactactat ggatataaaa gatctggtta aacaatttca tcagattaaa gtagagaaat
361 ggtcagaagg aacgacacca cagaagaaat tagaatgttt aaaagaacca ggaaaaacat
421 ctgtagaatc taaagtacct acccagatgg aaaaatctac agacacagac gaggacaatg
481 taaccagaac agaatatagt gacaaaacca cccagtttcc atcagtttat gctgtgccag
541 gcactgagca aacggaagca gttggtggtc tttcttccaa accagccacc cctaagacta
601 ctaccccacc ctcatcacca cctccaacag ctgtctcacc agagtttgcc tacgtcccag
661 ctgacccagc tcagcttgct gctcagatgt tagcaatggc aacaagtgaa cgaggacaac
721 caccaccatg ttctaacatg tggacccttt attgtctaac tgataagaat caacaaggtc
781 acccatcacc gccacctgca cctgggcctt ttccccaagc aaccctctat ttacctaatc
841 ctaaggatcc acagtttcag cagcatccac caaaagtcac ttttccaact tatgtgatgg
901 gcgacaccaa gaagaccagt gccccacctt ttatcttagt aggctcaaat gttcaggaag
961 cacagggatg gaaacctctt cccggacatg ctgtcgtttc acagtcagat gtcttgagat
1021 atgttgcaat gcaagtgccc attgctgttc ctgcagatga gaaataccag aaacataccc
1081 taagtcccca gaatgctaat cctccaagtg gacaagatgt ccccaggcca aaaagccctg
1141 ttttcctttc tgttgctttc ccagtagaag atgtagctaa aaaaagttca ggatctggtg
1201 acaaatgtgc tccctttgga agttacggta ttgctgggga ggtaaccgtg actactgctc
1261 acaaacgtcg caaagcagaa actgaaaact gatccagaaa tgacgctgtc tgggtcaaca
1321 tttcagggag gagtctgcca ccagtgtaat gtatcaataa acttcatgca agcataaaaa
1381 aaaaaaaaaa
//