LOCUS BC011947 1696 bp mRNA linear HUM 04-AUG-2006
DEFINITION Homo sapiens zinc finger protein 169, mRNA (cDNA clone
IMAGE:3863569), complete cds.
ACCESSION BC011947
VERSION BC011947.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1696)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1696)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC011947.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: i Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34996534
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1696
/db_xref="H-InvDB:HIT000050561"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3863569"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1696
/gene="ZNF169"
/gene_synonym="MGC51961"
/db_xref="GeneID:169841"
/db_xref="HGNC:HGNC:12957"
/db_xref="MIM:603404"
CDS 56..436
/gene="ZNF169"
/gene_synonym="MGC51961"
/codon_start=1
/product="ZNF169 protein"
/protein_id="AAH11947.1"
/db_xref="GeneID:169841"
/db_xref="HGNC:HGNC:12957"
/db_xref="MIM:603404"
/translation="MSPGLLTTRKEALMAFRDVAVAFTQKEWKLLSSAQRTLYREVML
ENYSHLVSLGIAFSKPKLIEQLEQGDEPWREENEHLLDLCPGEWEALGKRGCRAVRSS
AGKEGGAIFEVLGGSSSSGLLGHW"
BASE COUNT 384 a 412 c 413 g 487 t
ORIGIN
1 atttgcctct gcaacttgac tctcctctag gaagagtact ccagagagca gggatatgtc
61 accaggactc ctgacaacca ggaaggaggc attgatggcc ttccgggatg tggctgtggc
121 cttcacccag aaggagtgga agctattgag ttctgctcag aggaccctgt acagggaggt
181 gatgctggag aactacagcc atctggtctc cctgggaatt gcattttcca aaccaaaact
241 catcgaacag ctggagcaag gcgacgaacc ttggagagag gagaacgaac atcttctgga
301 cctttgtcca ggtgagtggg aagccctggg caagcgaggg tgcagggcag tgaggagctc
361 agcaggtaag gaaggagggg ctatctttga ggtgctagga ggaagttctt cttcaggcct
421 cctaggccac tggtaaaggc tgcatggcac tgcctgcctt ccacactgtg tgcctccccc
481 caggacaggg cacccctggc attccatctc cttcctccat cagggagcct cactcctcac
541 ttggcttcct ttctcgagca cattcaggat ttctccattc ttgggctcat gtggttggca
601 tgatcttcaa aacagtacct gtcctttgag actaagtccc tgcccctggt tttttatttt
661 tatttttatt ttttttgaga cagagtctcg ttctgtcacc caggctggag tgcaatggcg
721 tgatctcggc tcactgcaac ctctgcctcc tgtgttcaag tgatttctcc tgcctcaccc
781 tcctgagtag ctgggactac aggtgcccgc catcatgccc agctaaattt ttttgtattt
841 ttggtagaga tggggtttca ccttattggt caggctggtc ttgaattcct gagctcaggc
901 aatccatctg cctttgcttc ccaaagtgtt gggattacag gcgtgagcca ccacgcccag
961 ccagtttcta ttcttaacct ggtagctttt ttgtgcatca tttctatcct gtaaattctc
1021 ataactttgt ttcttttatc atagattatt taagattaca gcaaggtgtg aaaaactgta
1081 caatgagtag ggttggggca gccctgtacc ctaagagata gcatgttata aaaccaggta
1141 atcgccccat acttttcctg attgtgtccc gttcctccgc ctctgttttc tgagttagca
1201 ttccatgact gtctttatcc ttttattcca tctgatgggt tcttcactca tatagggtgt
1261 tgttttgcat gtctgtaaac ttctctgcac ataatgttat taagttgttt ccaacttttt
1321 ggctatgaaa taatcttgct ctgtattctt gtatgcctcc ttgggaacat gtccaagagt
1381 ttctcttaaa atatataccg gccaggtgca gtggctcaca cctgtaatcc cagcactctg
1441 ggaggccgag gcaggtggat cacgaggtca ggaattcgag accattctgg ccaacatggt
1501 gaaaccccgt ctctactaaa aatagaaaaa ttggctgggt gtggtggcgc atgcctataa
1561 tcttagctgc ttgggaggct gaggcaggag aattgcttga atccgggagg cggacgttgc
1621 agtgaactga gattgcgcca ctgcactcca gcctaggtga cagagcgagt ctccatctca
1681 caaaaaaaaa aaaaaa
//