LOCUS BC011900 1810 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sialidase 1 (lysosomal sialidase), mRNA (cDNA clone
MGC:20282 IMAGE:4101695), complete cds.
ACCESSION BC011900
VERSION BC011900.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1810)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1810)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC011900.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: i Column: 8.
FEATURES Location/Qualifiers
source 1..1810
/db_xref="H-InvDB:HIT000035526_11"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20282 IMAGE:4101695"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1810
/gene="NEU1"
/gene_synonym="SIAL1"
/db_xref="GeneID:4758"
/db_xref="HGNC:HGNC:7758"
/db_xref="MIM:608272"
CDS 29..1276
/gene="NEU1"
/gene_synonym="SIAL1"
/codon_start=1
/product="sialidase 1 (lysosomal sialidase)"
/protein_id="AAH11900.1"
/db_xref="GeneID:4758"
/db_xref="HGNC:HGNC:7758"
/db_xref="MIM:608272"
/translation="MTGERPSTALPDRRWGPRILGFWGGCRVWVFAAIFLLLSLAASW
SKAENDFGLVQPLVTMEQLLWVSGRQIGSVDTFRIPLITATPRGTLLAFAEARKMSSS
DEGAKFIALRRSMDQGSTWSPTAFIVNDGDVPDGLNLGAVVSDVETGVVFLFYSLCAH
KAGCQVASTMLVWSKDDGVSWSTPRNLSLDIGTEVFAPGPGSGIQKQREPRKGRLIVC
GHGTLERDGVFCLLSDDHGASWRYGSGVSGIPYGQPKQENDFNPDECQPYELPDGSVV
INARNQNNYHCHCRIVLRSYDACDTLRPRDVTFDPELVDPVVAAGAVVTSSGIVFFSN
PAHPEFRVNLTLRWSFSNGTSWRKETVQLWPGPSGYSSLATLEGSMDGEEQAPQLYVL
YEKGRNHYTESISVAKISVYGTL"
BASE COUNT 404 a 490 c 513 g 403 t
ORIGIN
1 gccagggtcg cggcagctgc ggggagagat gactggggag cgacccagca cggcgctccc
61 ggacagacgc tgggggccgc ggattctggg cttctgggga ggctgtaggg tttgggtgtt
121 tgccgcgatc ttcctgctgc tgtctctggc agcctcctgg tccaaggctg agaacgactt
181 cggtctggtg cagccgctgg tgaccatgga gcaactgctg tgggtgagcg ggagacagat
241 cggctcagtg gacaccttcc gcatcccgct catcacagcc actccgcggg gcactcttct
301 cgcctttgct gaggcgagga aaatgtcctc atccgatgag ggggccaagt tcatcgccct
361 gcggaggtcc atggaccagg gcagcacatg gtctcctaca gcgttcattg tcaatgatgg
421 ggatgtcccc gatgggctga accttggggc agtagtgagc gatgttgaga caggagtagt
481 atttcttttc tactcccttt gtgctcacaa ggccggctgc caggtggcct ctaccatgtt
541 ggtatggagc aaggatgatg gtgtttcctg gagcacaccc cggaatctct ccctggatat
601 tggcactgaa gtgtttgccc ctggaccggg ctctggtatt cagaaacagc gggagccacg
661 gaagggccgc ctcatcgtgt gtggccatgg gacgctggag cgggacggag tcttctgtct
721 cctcagcgat gatcatggtg cctcctggcg ctacggaagt ggggtcagcg gcatccccta
781 cggtcagccc aagcaggaaa atgatttcaa tcctgatgaa tgccagccct atgagctccc
841 agatggctca gtcgtcatca atgcccgaaa ccagaacaac taccactgcc actgccgaat
901 tgtcctccgc agctatgatg cctgtgatac actaaggccc cgtgatgtga ccttcgaccc
961 tgagctcgtg gaccctgtgg tagctgcagg agctgtagtc accagctccg gcattgtctt
1021 cttctccaac ccagcacatc cagagttccg agtgaacctg accctgcgat ggagcttcag
1081 caatggtacc tcatggcgga aagagacagt ccagctatgg ccaggcccca gtggctattc
1141 atccctggca accctggagg gcagcatgga tggagaggag caggcccccc agctctacgt
1201 cctgtatgag aaaggccgga accactacac agagagcatc tccgtggcca aaatcagtgt
1261 ctatgggaca ctctgagctg tgccactgcc acaggggtat tctgccttca ggactctgcc
1321 ttcaggaaca cgggtctgta gagggtctgc tggagacgcc tgaaagacag ttccatcttc
1381 ctttagactc cagccttggc aaaatcacct tccctttacc agggaaatca cttcctttag
1441 gactgaaagc taggcgtcct ctcccacaaa aaagtcctgc cctcaactga gaatactgtc
1501 tttccatatg gctaagtgtg gccccaccac cctctctgcc ctcccgggac attgattggt
1561 cctgtcttgg gcaggtctag tgagctgtag aattgaatca atgtgaactc agggaactgg
1621 ggaaggctga gcctcctctt tggtgttgcg gtaagataac cgacagggct ggtgaaagtc
1681 cccagatggc aggatatttg gtttcagagt aaggactagg tgcaccacca tgactgacta
1741 tcaatcaaaa tgtttgtaac ttaaaatttt taatgaagga taatgaataa aaaaaaaaaa
1801 aaaaaaaaaa
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