LOCUS BC011897 1961 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens HSPB (heat shock 27kDa) associated protein 1, mRNA
(cDNA clone MGC:20279 IMAGE:3949150), complete cds.
ACCESSION BC011897
VERSION BC011897.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1961)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1961)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC011897.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: g Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147627.
FEATURES Location/Qualifiers
source 1..1961
/db_xref="H-InvDB:HIT000035524"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20279 IMAGE:3949150"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1961
/gene="HSPBAP1"
/gene_synonym="FLJ22623"
/gene_synonym="PASS1"
/db_xref="GeneID:79663"
/db_xref="HGNC:HGNC:16389"
/db_xref="MIM:608263"
CDS 124..1590
/gene="HSPBAP1"
/gene_synonym="FLJ22623"
/gene_synonym="PASS1"
/codon_start=1
/product="HSPB (heat shock 27kDa) associated protein 1"
/protein_id="AAH11897.1"
/db_xref="GeneID:79663"
/db_xref="HGNC:HGNC:16389"
/db_xref="MIM:608263"
/translation="MAAGSEATTPVIVAAGAGGEEGEHVKPFKPEKAKEIIMSLQQPA
IFCNMVFDWPARHWNAKYLSQVLHGKQIRFRMGMKSMSTVPQFETTCNYVEATLEEFL
TWNCDQSSISGPFRDYDHSKFWAYADYKYFVSLFEDKTDLFQDVKWSDFGFPGRNGQE
STLWIGSLGAHTPCHLDSYGCNLVFQVQGRKRWHLFPPEDTPFLYPTRIPYEESSVFS
KINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVTVSINSWIELE
EDHLARVEEAITRMLVCALKTAENPQNTRAWLNPTEVEETSHAVNCCYLNAAVSAFFD
RCRTSEVVEIQALRTDGEHMKKEELNVCNHMEVGQTGSQNLTTGTDKPEAASPFGPDL
VPVAQRSEEPPSERGGIFGSDGKDFVDKDGEHFGKLHCAKRQQIMSNSENAIEEQIAS
NTTTTPQTFISTDDLLDCLVNPQVTRIVAQLLIQGRSL"
BASE COUNT 577 a 427 c 442 g 515 t
ORIGIN
1 ggcgggagtc gccggggctt cttcctgtgg tgcagcttcg ggtctcggag tttggcccct
61 actctgaccc caccccagct ccgctccgcc ttgggttccg gcagaacccg ccttgcggta
121 gccatggcag caggctccga ggcgaccact cctgtgatcg ttgcggctgg ggctggaggg
181 gaggaaggtg aacatgtcaa accttttaag ccagagaaag caaaagaaat tatcatgtct
241 ttacaacaac ctgcaatctt ctgtaacatg gtgtttgatt ggccagcacg acactggaat
301 gctaaatacc tttcgcaggt ccttcatggc aagcagatac gattcagaat ggggatgaaa
361 agcatgagca cagttcctca gtttgaaact acatgtaatt acgtagaagc tacactcgaa
421 gagtttctga cctggaactg tgaccagtct agtatttctg gaccatttag agattatgac
481 cattccaagt tctgggctta tgctgactat aaatattttg tcagtctatt tgaagacaag
541 acagatcttt tccaggatgt gaaatggtct gacttcgggt ttcctggaag aaatggacag
601 gaaagtacat tgtggattgg ctccttggga gcccacacac cctgtcatct ggactcctat
661 ggttgtaact tggtattcca ggtacaagga aggaaacgat ggcatctctt tcctcctgaa
721 gatactcctt tcctttatcc aactagaatc ccttatgaag aatctagtgt gttcagtaaa
781 atcaatgttg tcaatcctga tttaaagcgt tttcctcagt tccggaaagc tcaaagacat
841 gcggttacac tgagcccagg acaggttctc tttgttccca gacactggtg gcattacgta
901 gaatccattg atcctgtcac tgtcagtata aactcatgga ttgaactgga agaggatcac
961 ctagcccggg tagaagaggc aatcacccgt atgcttgtgt gtgccctgaa aactgcagag
1021 aatccacaaa ataccagagc ctggttaaac cccactgagg ttgaggaaac gtcccatgca
1081 gtcaactgtt gctacttaaa tgcagctgtt tctgcatttt ttgatcgctg cagaacatct
1141 gaggtagtag aaatccaagc actgagaaca gatggagagc acatgaaaaa ggaagaatta
1201 aatgtgtgca accacatgga ggtgggccaa acaggtagcc agaacttgac cacaggaaca
1261 gacaaaccgg aggcagcaag tccctttggc cctgatctgg tccctgtagc acagaggtcc
1321 gaagaaccgc cttcagaaag aggaggcata tttggaagtg atgggaaaga ctttgtggac
1381 aaggatggag aacactttgg aaaattgcat tgtgccaaga gacaacaaat aatgagcaac
1441 agtgaaaatg caattgagga acagattgcc tcaaatacta ctacgactcc tcaaacattc
1501 atttctacgg atgacttgct ggactgcttg gtgaatccac aagtaaccag gatagtggca
1561 caacttttga tacaaggaag aagtttatga ttcaagtgga agatgacttt taaaataata
1621 ttttttaaat atatattttt aagtagtatg actaaaataa agatgaacca gcaaaaggtc
1681 agtttgcaca tttgtaaatg tatttatcct taccgaatta catgtcagtc tgttgccacc
1741 ttctttcatg cacattcctc tttggccaaa ctggctgctc tttgtttgta agcttttgtt
1801 cctctctcat cccatacttt tagcctgtgt caaatgtaag tcccaagtat ttccagcagg
1861 aagtaatgtc ttcctcagcc tcaaccaggg accaaccggc tgcttacttt tgcaaataaa
1921 attttactag aacacgaaca aaaaaaaaaa aaaaaaaaaa a
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