LOCUS       BC011892                2291 bp    mRNA    linear   HUM 04-OCT-2003
DEFINITION  Homo sapiens cofactor of BRCA1, mRNA (cDNA clone MGC:19886
            IMAGE:3941719), complete cds.
ACCESSION   BC011892
VERSION     BC011892.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUL-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 28 Row: g Column: 8
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 20070259.
FEATURES             Location/Qualifiers
     source          1..2291
                     /db_xref="H-InvDB:HIT000035521"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:19886 IMAGE:3941719"
                     /tissue_type="Lung, small cell carcinoma"
                     /clone_lib="NIH_MGC_7"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2291
                     /gene="COBRA1"
                     /gene_synonym="DKFZP586B0519"
                     /gene_synonym="NELF-B"
                     /gene_synonym="NELFB"
                     /db_xref="GeneID:25920"
     CDS             235..1662
                     /gene="COBRA1"
                     /gene_synonym="DKFZP586B0519"
                     /gene_synonym="NELF-B"
                     /gene_synonym="NELFB"
                     /codon_start=1
                     /product="COBRA1 protein"
                     /protein_id="AAH11892.1"
                     /db_xref="GeneID:25920"
                     /translation="MPSLQPVVMCVMKHLPKVPEKKLKLVMADKELYRACAVEVKRQI
                     WQDNQALFGDEVSPLLKQYILEKESALFSTELSVLHNFFSPSPKTRRQGEVVQRLTRM
                     VGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLMSLHDLDVGEICTVDPCHKFTWC
                     LDACIRERFVDSKRARELQGFLDGVKKGQEQVLGDLSMILCDPFAINTLALSTVRHLQ
                     ELVGQETLPRDSPDLLLLLRLLALGQGAWDMIDSQVFKEPKMEVELITRFLPMLMSFL
                     VDDYTFNVDQKLPAEEKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHITKQRNKN
                     ALLRLLPGLVETFGDLAFGDIFLHLLTGNLALLADEFALEDFCSSLFDGFFLTASPRK
                     ENVHRHALRLLIHLHPRVAPSKLEALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRK
                     PSPAQAAETPALELPLPSVPAPAPL"
BASE COUNT          438 a          683 c          720 g          450 t
ORIGIN      
        1 ggcacgaggg agcagttcca gacagagaat ggtgtgctgc tgccatctct tcagtcagcc
       61 ctccccttct tggacctgca cgggacgccg cggctggagt tccaccagtc ggtattcgat
      121 gagctgcggg acaagctgct ggagcgagtg tcagccatcg cttcggaggg gaaggctgag
      181 gaaaggtaca agaagctgga agaccttctg gagaagagct tttctctggt gaagatgccg
      241 tccctgcagc ccgtggtgat gtgcgtcatg aagcacctgc ccaaggttcc ggagaaaaaa
      301 ctgaagctgg ttatggctga caaggagctg tatcgagcct gcgccgtgga ggtgaagcgg
      361 cagatctggc aagacaacca ggccctcttc ggggacgagg tttccccact cctgaagcag
      421 tacatcctgg agaaggagag cgctctcttc agtacagagc tctctgtcct gcacaacttt
      481 ttcagtcctt cccccaagac caggcgccag ggcgaggtgg tgcagcggct gacgcggatg
      541 gtggggaaga acgtgaagct gtacgacatg gtgctgcagt ttctgcgcac gctcttcctg
      601 cgcacgcgga atgtgcacta ctgcacgctg cgggctgagc tgctcatgtc cctgcacgac
      661 ctggacgtgg gtgaaatctg caccgtggac ccgtgccaca agttcacctg gtgcctggac
      721 gcctgcatcc gagagcggtt cgtggacagc aagagggcgc gggagctgca ggggtttctc
      781 gatggcgtca agaagggcca ggagcaggtg ctgggggacc tgtccatgat cctgtgtgac
      841 cccttcgcca tcaacacgct ggcactgagc acagtcaggc acctgcagga gctggtcggc
      901 caggagacac tgcccaggga cagccccgac ctcctgctgc tgctccggct gctggcgctg
      961 ggccagggag cctgggacat gatcgacagc caggtcttca aggagcccaa gatggaggta
     1021 gagctcatca ccaggttcct cccgatgctc atgtccttcc tggtggatga ctacactttc
     1081 aatgtggatc agaaacttcc ggctgaggag aaagccccag tctcatatcc aaacacactt
     1141 cccgaaagct tcactaagtt tctgcaggag cagcgcatgg cctgcgaggt ggggctgtac
     1201 tacgtcctgc acatcaccaa gcagaggaac aagaacgcgc tcctccgcct gctgcccggg
     1261 ctggtggaga cctttggcga cttggccttt ggcgacatct tcctccacct gctcacgggc
     1321 aaccttgcgc tgctggccga cgaatttgcc cttgaggact tctgcagcag cctcttcgat
     1381 ggcttcttcc tcaccgcctc tccaaggaag gagaacgtgc accggcacgc gctgcggctc
     1441 ctcattcacc tgcaccccag ggtggcccca tctaagctgg aggcgttgca gaaggccctg
     1501 gagcctacag gccagagcgg agaggcagtg aaggagcttt actcccagct cggcgagaag
     1561 ctggaacagc tggatcaccg gaagcccagc ccggcacagg ctgcggagac gccggccctg
     1621 gagctgcccc tccccagcgt gcccgcccct gccccgctct gagggccctc cagacctgct
     1681 cgggtgctgg ggccatgccg agtcgcggcc ctgctcagcc ggaagaggct cccggacctg
     1741 gatgtacagg gcagtctctc ttcccggggc tatggctggg cctgtcctgc cgtcatggcc
     1801 ccctgcttcc tgctccttgg agctggctcc cggaccttgc ccaccatcca tgcagtggct
     1861 cccagggcag agcctctcct tgtactttgg cagccataga aagcgtgctc attttctgtt
     1921 ttcctgtgtt aggaaaaaac cacctgtttt ccaaggggag agggcggggc ctgagggtgg
     1981 gggcggggcc tcttcattgg cccagcttgg cgaaagcgag gcacactgct tactgccttg
     2041 gggttgtgga gatggacccg tgacctcgtg gaggccgtgt gggggcagca gcctggcctg
     2101 tgccatggtg ggtgtcctgg ggcctgtgcg gagggagcca cctcaccctg cagcccaggt
     2161 tgcaggtgtg gccttgtttc tccttgccca gcagtgctgc cttcagcggc cgtgacgggg
     2221 ccagctggac acacggtgag attttctcgt atgtaaataa aaggcaattt ggtaaaaaaa
     2281 aaaaaaaaaa a
//