LOCUS BC011842 780 bp mRNA linear HUM 26-JUN-2008
DEFINITION Homo sapiens chromosome 4 open reading frame 43, mRNA (cDNA clone
MGC:19960 IMAGE:4110177), complete cds.
ACCESSION BC011842
VERSION BC011842.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 780)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 780)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011842.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922922.
FEATURES Location/Qualifiers
source 1..780
/db_xref="H-InvDB:HIT000035486"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19960 IMAGE:4110177"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..780
/gene="C4orf43"
/db_xref="GeneID:55319"
/db_xref="HGNC:HGNC:25638"
CDS 99..710
/gene="C4orf43"
/codon_start=1
/product="chromosome 4 open reading frame 43"
/protein_id="AAH11842.1"
/db_xref="GeneID:55319"
/db_xref="HGNC:HGNC:25638"
/translation="MPKAPKGKSAGREKKVIHPYSRKAAQITREAHKQEKKEKLKNEK
ALRLNLVGEKLQWFQNHLDPPKKRYSKKDACELIERYLNRFSSELEQIELHNSIRDRQ
GRRHCSRETVIKQTMERERQQFEGYGLEIPDILNASNLKTFREWDFDLKKLPNIKMRK
ICANDAIPKTCKRKTTITVDQDLGELELNDESSDSDEEMTAVA"
BASE COUNT 288 a 132 c 195 g 165 t
ORIGIN
1 gtggaggagg ggtgctcttg tgagctgctg ctcctgcggt tggtgagatt acctgggtct
61 agagtgcgga gctgctccgt ggccacgagg acgtcaccat gcccaaagca ccaaagggaa
121 aaagtgcagg acgggaaaaa aaagtcatcc atccatatag tagaaaagca gctcaaatta
181 cgagagaggc ccacaaacaa gaaaaaaagg aaaaattgaa gaatgaaaag gccttgcgtc
241 tcaaccttgt tggtgaaaaa ctgcaatggt ttcaaaatca tcttgatccc ccaaaaaaga
301 gatattcaaa gaaagatgct tgtgaactaa ttgaaaggta cttaaatcga ttcagcagtg
361 agctggagca gattgagtta cataacagta tcagggacag gcaggggagg cggcactgtt
421 cccgggagac cgtcatcaag cagacgatgg agcgggagcg acagcagttt gagggatatg
481 gccttgagat tccagacatt ctaaatgcaa gtaatctgaa aacatttagg gaatgggact
541 ttgatctgaa gaaattacca aacattaaaa tgagaaaaat ttgcgctaat gatgcaattc
601 ccaagacgtg caagaggaaa actactataa ctgtagacca agatttgggg gaattggaac
661 taaacgatga atcaagtgat tcagatgagg aaatgactgc agtggcctaa ttgtcttcac
721 ttgaattgaa aataaataat ttgagagctt caaattaaaa aaaaaaaaaa aaaaaaaaaa
//