LOCUS BC011828 2055 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens calpain 2, (m/II) large subunit, mRNA (cDNA clone IMAGE:3833113), partial cds. ACCESSION BC011828 VERSION BC011828.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2055) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2055) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC011828.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 28 Row: e Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12408645. FEATURES Location/Qualifiers source 1..2055 /db_xref="H-InvDB:HIT000087718" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3833113" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..>2055 /gene="CAPN2" /gene_synonym="CANPL2" /gene_synonym="CANPml" /gene_synonym="mCANP" /db_xref="GeneID:824" /db_xref="HGNC:HGNC:1479" /db_xref="MIM:114230" CDS 225..>2055 /gene="CAPN2" /gene_synonym="CANPL2" /gene_synonym="CANPml" /gene_synonym="mCANP" /codon_start=1 /product="CAPN2 protein" /protein_id="AAH11828.1" /db_xref="GeneID:824" /db_xref="HGNC:HGNC:1479" /db_xref="MIM:114230" /translation="MAGIAAKLAKDREAAEGLGSHERAIKYLNQDYEALRNECLEAGT LFQDPSFPAIPSALGFKELGPYSSKTRGIEWKRPTEICADPQFIIGGATRTDICQGAL GDCWLLAAIASLTLNEEILARVVPLNQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPT KDGELLFVHSAEGSEFWSALLEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELK KPPPNLFKIIQKALQKGSLLGCSIDITSAADSEAITFQKLVKGHAYSVTGAEEVESNG SLQKLIRIRNPWGEVEWTGRWNDNCPSWNTIDPEERERLTRRHEDGEFWMSFSDFLRH YSRLEICNLTPDTLTSDTYKKWKLTKMDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLE EEDEDEEDGESGCTFLVGLIQKHRRRQRKMGEDMHTIGFGIYEVPEELSGQTNIHLSK NFFLTNRARERSDTFINLREVLNRFKLPPGEYILVPSTFEPNKDGDFCIRVFSEKKAD YQAVDDEIEANLEEFDISEDDIDDGFRRLFAQLAGEDAEISAFELQTILRRVLAKRQD IKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYILWTKIQKKKKK" BASE COUNT 493 a 573 c 635 g 354 t ORIGIN 1 caggccgcag gatggcctgg tcccgggccg ggagcccagc aggccgggag cggctgaggc 61 cacaccccgc gggccgggcc gcttccctcc ggtgaatcat cgctcgcagc ggcggcgccc 121 gcagtggccg cagcagcgcg ccgggccctg gccgcgcccc agccgagcgc agcgcggagt 181 cgccccgacc tttctctgcg cagtacggcc gccgggaccg cagcatggcg ggcatcgcgg 241 ccaagctggc gaaggaccgg gaggcggccg aggggctggg ctcccacgag agggccatca 301 agtacctcaa ccaggactac gaggcgctgc ggaacgagtg cctggaggcc gggacgctct 361 tccaggaccc gtccttcccg gccatcccct cggccctggg cttcaaggag ttggggccct 421 actccagcaa aacccggggc atcgagtgga agcgccccac ggagatctgc gctgaccccc 481 agtttatcat tggaggagcc acccgcacag acatctgcca aggagccctg ggtgactgct 541 ggctgctggc agccattgcc tccctcacct tgaatgaaga aatcctggct cgagtcgtcc 601 ccctaaacca gagcttccag gaaaactatg cagggatctt tcacttccag ttctggcaat 661 acggcgagtg ggtggaggtg gtggtggatg acaggctgcc caccaaggac ggggagctgc 721 tctttgtgca ttcagccgaa gggagcgagt tctggagcgc cctgctggag aaggcatacg 781 ccaagatcaa cggatgctat gaagcactat cagggggtgc caccactgag ggcttcgaag 841 acttcaccgg aggcattgct gagtggtatg agttgaagaa gccccctccc aacctgttca 901 agatcatcca gaaagctctg caaaaaggct ctctccttgg ctgctccatc gacatcacca 961 gcgccgcgga ctcggaggcc atcacgtttc agaagctggt gaaggggcac gcgtactcgg 1021 tcaccggagc cgaggaggtt gaaagtaacg gaagcctaca gaaactgatc cgcatccgaa 1081 atccctgggg agaagtggag tggacagggc ggtggaatga caactgccca agctggaaca 1141 ctatagaccc agaggagagg gaaaggctga ccagacggca tgaagatgga gaattctgga 1201 tgtctttcag tgacttcctg aggcactatt cccgcctgga gatctgtaac ctgaccccag 1261 acactctcac cagcgatacc tacaagaagt ggaaactcac caaaatggat gggaactgga 1321 ggcggggctc caccgcggga ggttgcagga actacccgaa cacattctgg atgaaccctc 1381 agtacctgat caagctggag gaggaggatg aggacgagga ggatggggag agcggctgca 1441 ccttcctggt ggggctcatt cagaagcacc gacggcggca gaggaagatg ggcgaggaca 1501 tgcacaccat cggctttggc atctatgagg ttccagagga gttaagtggg cagaccaaca 1561 tccacctcag caaaaacttc ttcctgacga atcgcgccag ggagcgctca gacaccttca 1621 tcaacctccg ggaggtgctc aaccgcttca agctgccgcc aggagagtac attctcgtgc 1681 cttccacctt cgaacccaac aaggatgggg atttctgcat ccgggtcttt tctgaaaaga 1741 aagctgacta ccaagctgtc gatgatgaaa tcgaggccaa tcttgaagag ttcgacatca 1801 gcgaggatga cattgatgat ggattcagga gactgtttgc ccagttggca ggagaggatg 1861 cggagatctc tgcctttgag ctgcagacca tcctgagaag ggttctagca aagcgccaag 1921 atatcaagtc agatggcttc agcatcgaga catgcaaaat tatggttgac atgctagatt 1981 cggacgggag tggcaagctg gggctgaagg agttctacat tctctggacg aagattcaaa 2041 aaaaaaaaaa aaaaa //