LOCUS BC011822 1712 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens UBA domain containing 1, mRNA (cDNA clone MGC:19939
IMAGE:3688526), complete cds.
ACCESSION BC011822
VERSION BC011822.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1712)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1712)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55770883.
FEATURES Location/Qualifiers
source 1..1712
/db_xref="H-InvDB:HIT000035473"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19939 IMAGE:3688526"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1712
/gene="UBAC1"
/gene_synonym="GBDR1"
/gene_synonym="RP11-432J22.3"
/db_xref="GeneID:10422"
/db_xref="HGNC:HGNC:30221"
/db_xref="MIM:608129"
CDS 45..1262
/gene="UBAC1"
/gene_synonym="GBDR1"
/gene_synonym="RP11-432J22.3"
/codon_start=1
/product="UBA domain containing 1"
/protein_id="AAH11822.1"
/db_xref="GeneID:10422"
/db_xref="HGNC:HGNC:30221"
/db_xref="MIM:608129"
/translation="MFVQEEKIFAGKVLRLHICASDGAEWLEEATEDTSVEKLKERCL
KHCAHGSLEDPKSITHHKLIHAASERVLSDARTILEENIQDQDVLLLIKKRAPSPLPK
MADVSAEEKKKQDQKAPDKEAILRATANLPSYNMDRAAVQTNMRDFQTELRKILVSLI
EVAQKLLALNPDAVELFKKANAMLDEDEDERVDEAALRQLTEMGFPENRATKALQLNH
MSVPQAMEWLIEHAEDPTIDTPLPGQAPPEAEGATAAASEAAAGASATDEEARDELTE
IFKKIRRKREFRADARAVISLMEMGFDEKEVIDALRVNNNQQNAACEWLLGDRKPSPE
ELDKGIDPDSPLFQAILDNPVVQLGLTNPKTLLAFEDMLENPLNSTQWMNDPETGPVM
LQISRIFQTLNRT"
BASE COUNT 433 a 448 c 499 g 332 t
ORIGIN
1 caggggcccg ggtggcgggc gcaggcccct gcggcggcgg cgggatgttc gtgcaggagg
61 agaagatctt cgcgggcaag gtgctgcggc tgcacatctg cgcgtccgac ggcgccgagt
121 ggctggagga ggccaccgag gacacctcgg tggagaagct caaggagcgc tgcctcaagc
181 actgtgctca tgggagctta gaagatccca aaagtataac ccatcataaa ttaatccacg
241 ctgcctcaga gagggtgctg agtgatgcca ggaccatcct ggaagagaac atccaggacc
301 aagatgtcct attattgata aaaaagcgtg ctccatcacc acttcccaag atggctgatg
361 tctcagcaga agaaaagaaa aaacaagacc agaaagctcc agataaagag gccatactgc
421 gggccaccgc caacctgccc tcctacaaca tggaccgggc cgcggtccag accaacatga
481 gagacttcca gacagaactc cggaagatac tggtgtctct catcgaggtg gcgcagaagc
541 tgttagcgct gaacccagat gcggtggaat tgtttaagaa ggcgaatgca atgctggacg
601 aggacgagga tgagcgtgtg gacgaggctg ccctgcggca gctcacggag atgggctttc
661 cggagaacag agccaccaag gcccttcagc tgaaccacat gtcggtgcct caggccatgg
721 agtggctaat tgaacacgca gaagacccga ccatagacac gcctcttcct ggccaagctc
781 ccccagaggc cgagggggcc acagcagctg cctccgaggc tgccgcggga gccagcgcca
841 ccgatgagga ggccagagat gagctgacgg aaatcttcaa gaagatccgg aggaaaaggg
901 agtttcgggc tgatgctcgg gccgtcattt ccctgatgga gatggggttc gacgagaaag
961 aggtgataga tgccctcaga gtgaacaaca accagcagaa tgccgcgtgc gagtggctgc
1021 tgggggaccg gaagccctct ccggaggagc tggacaaggg catcgacccc gacagtcctc
1081 tctttcaggc catcctggat aacccggtgg tgcagctggg cctgaccaac ccgaaaacat
1141 tgctagcatt tgaagacatg ctggagaacc cactgaacag cacccagtgg atgaatgatc
1201 cagaaacggg gcctgtcatg ctgcagatct ctagaatctt ccagacacta aatcgcacgt
1261 aggtggcgtt gttccactcg gctatcaggc cacagcagcc ccctggtgcg gcccgagacc
1321 gggcagagtg gacctcacct ggaaactcac cttcagcgcc tcagccctgg actgttagag
1381 gtgctgcagc tgctcctgct ctctgatctt attgcttata aactttggtg acggtagtgt
1441 gtaaggccgt atttttagca tctgacaggt gtttacaaaa aagtggttgt cgcactggga
1501 agtggagtga tggcctcgtc tccagtgctc ctctgggctc ttgagttgct gcttgaattg
1561 ccgtgtagac atttgcttgg agagtccact tgttatttga cggaggtagg tttcaaccca
1621 gagttaatgt caagcatgct aatttaacta gtcactcaca gatgactttt ctttaataaa
1681 gtcccttttc ctaaaaaaaa aaaaaaaaaa aa
//