LOCUS BC011819 2499 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked,
mRNA (cDNA clone MGC:20129 IMAGE:3617040), complete cds.
ACCESSION BC011819
VERSION BC011819.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2499)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2499)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011819.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 28 Row: c Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13514812.
FEATURES Location/Qualifiers
source 1..2499
/db_xref="H-InvDB:HIT000035471"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20129 IMAGE:3617040"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2499
/gene="DDX3X"
/gene_synonym="DBX"
/gene_synonym="DDX14"
/gene_synonym="HLP2"
/db_xref="GeneID:1654"
/db_xref="HGNC:HGNC:2745"
/db_xref="MIM:300160"
CDS 71..2059
/gene="DDX3X"
/gene_synonym="DBX"
/gene_synonym="DDX14"
/gene_synonym="HLP2"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked"
/protein_id="AAH11819.1"
/db_xref="GeneID:1654"
/db_xref="HGNC:HGNC:2745"
/db_xref="MIM:300160"
/translation="MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLR
NREATKGFYDKDSSGWSSSKDKDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRS
DYDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINF
EKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKR
DLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTR
ELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERG
KIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQML
ARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVET
KKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDIS
NVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQE
VPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARDYRQSSGASSSSFSSSRASSSRSG
GGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN"
BASE COUNT 732 a 474 c 643 g 650 t
ORIGIN
1 gagggccttc gcggtggaac aaacactcgc ttagcagcgg aagactccga gttctcggta
61 ctcttcaggg atgagtcatg tggcagtgga aaatgcgctc gggctggacc agcagtttgc
121 tggcctagac ctgaactctt cagataatca gagtggagga agtacagcca gcaaagggcg
181 ctatattcct cctcatttaa ggaaccgaga agctactaaa ggtttctacg ataaagacag
241 ttcagggtgg agttctagca aagataagga tgcgtatagc agttttggat ctcgtagtga
301 ttcaagaggg aagtctagct tcttcagtga tcgtggaagt ggatcaaggg gaaggtttga
361 tgatcgtgga cggagtgatt acgatggcat tggcagccgt ggtgacagaa gtggctttgg
421 caaatttgaa cgtggtggaa acagtcgctg gtgtgacaaa tcagatgaag atgattggtc
481 aaaaccactc ccaccaagtg aacgcttgga acaggaactc ttttctggag gcaacactgg
541 gattaatttt gagaaatacg atgacattcc agttgaggca acaggcaaca actgtcctcc
601 acatattgaa agtttcagtg atgttgagat gggagaaatt atcatgggaa acattgagct
661 tactcgttat actcgcccaa ctccagtgca aaagcatgct attcctatta tcaaagagaa
721 aagagacttg atggcttgtg cccaaacagg gtctggaaaa actgcagcat ttctgttgcc
781 catcttgagt cagatttatt cagatggtcc aggcgaggct ttgagggcca tgaaggaaaa
841 tggaaggtat gggcgccgca aacaataccc aatctccttg gtattagcac caacgagaga
901 gttggcagta cagatctacg aggaagccag aaaattttca taccgatcta gagttcgtcc
961 ttgcgtggtt tatggtggtg ccgatattgg tcagcagatt cgagacttgg aacgtggatg
1021 ccatttgtta gtagccactc caggacgtct agtggatatg atggaaagag gaaagattgg
1081 attagacttt tgcaaatact tggtgttaga tgaagctgat cggatgttgg atatggggtt
1141 tgagcctcag attcgtagaa tagtcgaaca agatactatg cctccaaagg gtgtccgcca
1201 cactatgatg tttagtgcta cttttcctaa ggaaatacag atgctggctc gtgatttctt
1261 agatgaatat atcttcttgg ctgtaggaag agttggctct acctctgaaa acatcacaca
1321 gaaagtagtt tgggtggaag aatcagacaa acggtcattt ctgcttgacc tcctaaatgc
1381 aacaggcaag gattcactga ccttagtgtt tgtggagacc aaaaagggtg cagattctct
1441 ggaggatttc ttataccatg aaggatacgc atgtaccagc atccatggag accgttctca
1501 gagggataga gaagaggccc ttcaccagtt ccgctcagga aaaagcccaa ttttagtggc
1561 tacagcagta gcagcaagag gactggacat ttcaaatgtg aaacatgtta tcaattttga
1621 cttgccaagt gatattgaag aatatgtaca tcgtattggt cgtacgggac gtgtaggaaa
1681 ccttggcctg gcaacctcat tctttaacga gaggaacata aatattacta aggatttgtt
1741 ggatcttctt gttgaagcta aacaagaagt gccgtcttgg ttagaaaaca tggcttatga
1801 acaccactac aagggtagca gtcgtggacg ttctaagagt agcagattta gtggagggtt
1861 tggtgccaga gactaccgac aaagtagcgg tgccagcagt tccagcttca gcagcagccg
1921 cgcaagcagc agccgcagtg gcggaggtgg ccacggtagc agcagaggat ttggtggagg
1981 tggctatgga ggcttttaca acagtgatgg atatggagga aattataact cccagggggt
2041 tgactggtgg ggtaactgag cctgctttgc agtaggtcac cctgccaaac aagctaatat
2101 ggaaaccaca tgtaacttag ccagactata ccttgtgtag cttcaagaac tcgcagtaca
2161 ttaccagctg tgattctcca ctgaaatttt ttttttaagg gagctcaagg tcacaagaag
2221 aaatgaaagg aacaatcagc agccctgttc agaaggtggt ttgaagactt cattgctgta
2281 gtttggatta actcccctcc cgcctacccc catcccaaac tgcatttata attttgtgac
2341 tgaggatcat ttgtttgtta atgtactgtg cctttaactt tagacaactt tttattttga
2401 tgtcctgttg gctcagtaat gctcaagata tcaattgttt tgacaaaata aatttactga
2461 acttgggcta aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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