LOCUS BC011793 2457 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger CCCH-type containing 14, mRNA (cDNA clone
MGC:19476 IMAGE:4298961), complete cds.
ACCESSION BC011793
VERSION BC011793.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2457)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2457)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50541971.
FEATURES Location/Qualifiers
source 1..2457
/db_xref="H-InvDB:HIT000258945"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19476 IMAGE:4298961"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2457
/gene="ZC3H14"
/gene_synonym="FLJ11806"
/gene_synonym="MGC26892"
/gene_synonym="NY-REN-37"
/gene_synonym="UKp68"
/db_xref="GeneID:79882"
/db_xref="HGNC:HGNC:20509"
CDS 92..2302
/gene="ZC3H14"
/gene_synonym="FLJ11806"
/gene_synonym="MGC26892"
/gene_synonym="NY-REN-37"
/gene_synonym="UKp68"
/codon_start=1
/product="zinc finger CCCH-type containing 14"
/protein_id="AAH11793.1"
/db_xref="GeneID:79882"
/db_xref="HGNC:HGNC:20509"
/translation="MEIGTEISRKIRSAIKGKLQELGAYVDEELPDYIMVMVANKKSQ
DQMTEDLSLFLGNNTIRFTVWLHGVLDKLRSVTTEPSSLKSSDTNIFDSNVPSNKSNF
SRGDERRHEAAVPPLAIPSARPEKRDSRVSTSSQESKTTNVRQTYDDGAATRLMSTVK
PLREPAPSEDVIDIKPEPDDLIDEDLNFVQENPLSQKKPTVTLTYGSSRPSIEIYRPP
ASRNADSGVHLNRLQFQQQQNSIHAAKQLDMQSSWVYETGRLCEPEVLNSLEETYSPF
FRNNSEKMSMEDENFRKRKLPVVSSVVKVKKFNHDGEEEEEDDDYGSRTGSISSSVSV
PAKPERRPSLPPSKQANKNLILKAISEAQESVTKTTNYSTVPQKQTLPVAPRTRTSQE
ELLAEVVQGQSRTPRISPPIKEEETKGDSVEKNQGTQQRQLLSRLQIDPVMAETLQMS
QDYYDMESMVHADTRSFILKKPKLSEEVVVAPNQESGMKTADSLRVLSGHLMQTRDLV
QPDKPASPKFIVTLDGVPSPPGYMSDQEEDMCFEGMKPVNQTAASNKGLRGLLHPQQL
HLLSRQLEDPNGSFSNAEMSELSVAQKPEKLLERCKYWPACKNGDECAYHHPISPCKA
FPNCKFAEKCLFVHPNCKYDAKCTKPDCPFTHVSRRIPVLSPKPAVAPPAPPSSSQLC
RYFPACKKMECPFYHPKHCRFNTQCTRPDCTFYHPTINVPPRHALKWIRPQTSE"
BASE COUNT 789 a 554 c 544 g 570 t
ORIGIN
1 ggcacgaggc cggctgcggg gtaggagtcc gcggcagcct ccgggtaagc caagcgccgc
61 gcagtgctga gttcccgcac gccgcagagc catggagatc ggcaccgaga tcagccgcaa
121 gatccggagt gccattaagg ggaaattaca agaattagga gcttatgttg atgaagaact
181 tcctgattac attatggtga tggtggccaa caagaaaagt caggaccaaa tgacagagga
241 tctgtccctg tttctaggga acaacacaat tcgattcacc gtatggcttc atggtgtatt
301 agataaactt cgctctgtta caactgaacc ctctagtctg aagtcttctg ataccaacat
361 ctttgatagt aacgtgcctt caaacaagag caatttcagt cggggagatg agaggaggca
421 tgaagctgca gtgccaccac ttgccattcc tagcgcgaga cctgaaaaaa gagattccag
481 agtttctaca agttcgcagg agtcaaaaac cacaaatgtc agacagactt acgatgatgg
541 agctgcaacc cgactaatgt caacagtgaa acctttgagg gagccagcac cctctgaaga
601 tgtgattgat attaagccag aaccagatga tctcattgac gaagacctca actttgtgca
661 ggagaatccc ttatctcaga aaaaacctac agtgacactt acatatggtt cttctcgccc
721 ttctattgaa atttatcgac cacctgcaag tagaaatgca gatagtggtg ttcatttaaa
781 caggttgcaa tttcaacagc agcagaatag tattcatgct gccaagcagc ttgatatgca
841 gagtagttgg gtatatgaaa caggacgttt gtgtgaacca gaggtgctta acagcttaga
901 agaaacgtat agtccgttct ttagaaacaa ctcggagaaa atgagtatgg aggatgaaaa
961 ctttcggaag agaaagttgc ctgtggtaag ttcagttgtt aaagtaaaaa aattcaatca
1021 tgatggagaa gaggaggaag aagatgatga ttacgggtct cgaacaggaa gcatctccag
1081 cagtgtgtct gtgcctgcaa agcctgaaag gagaccttct cttccacctt ctaaacaagc
1141 taacaagaat ctgattttga aggctatatc tgaagctcaa gaatccgtaa caaaaacaac
1201 taactactct acagttccac agaaacagac acttccagtt gctcccagaa ctcgaacttc
1261 tcaagaagaa ttgctagcag aagtggtcca gggacaaagt aggaccccca gaataagtcc
1321 ccccattaaa gaagaggaaa caaaaggaga ttctgtagaa aaaaatcaag gaactcaaca
1381 gaggcaatta ttatcccgac tgcaaatcga cccagtaatg gcagaaactc tgcagatgag
1441 tcaagattac tatgacatgg aatccatggt ccatgcagac acaagatcat ttattctgaa
1501 gaagccaaag ctgtctgagg aagtagtagt ggcaccaaac caagagtcgg ggatgaagac
1561 tgcagattcc cttcgggtac tttcaggaca ccttatgcag acacgagatc ttgtacaacc
1621 agataaacct gcaagtccca agtttatagt gacgctggat ggtgtcccca gccccccagg
1681 atacatgtca gatcaagagg aggacatgtg ctttgaagga atgaaacccg taaaccaaac
1741 tgcagcctca aacaagggac tcagaggtct cctccaccca cagcagttgc acttgctgag
1801 caggcagctt gaggacccaa atggtagctt ttctaacgct gagatgagtg aactgagtgt
1861 ggcacagaaa ccagaaaaac ttttggagcg ctgcaagtac tggcctgctt gtaaaaatgg
1921 ggatgagtgt gcctaccatc accccatctc accctgcaaa gccttcccca attgtaaatt
1981 tgctgaaaaa tgtttgtttg ttcacccaaa ttgtaaatat gatgcaaagt gtactaaacc
2041 agattgtccc ttcactcatg tgagtagaag aattccagta ctgtctccaa aaccagcagt
2101 tgcaccacca gcaccacctt ccagtagtca gctctgccgt tacttccctg cttgtaagaa
2161 gatggaatgt cccttctatc atccaaaaca ttgtaggttt aacactcaat gtacaagacc
2221 ggactgcaca ttctaccatc ccaccattaa tgtcccacca cgacatgcct tgaaatggat
2281 tcgacctcaa accagcgaat agcacccagt cctgcctggc agaagatcat gcagtttgga
2341 agttttcatg tactgatgaa agatactcta cagaacttgt caaatctttg aaacttggaa
2401 tatattgctt tcataatatg aagttttatt gcctatcaaa aaaaaaaaaa aaaaaaa
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