LOCUS BC011790 1553 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens tubulin, alpha 1c, mRNA (cDNA clone MGC:19827
IMAGE:4025017), complete cds.
ACCESSION BC011790
VERSION BC011790.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1553)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1553)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: l Column: 20.
FEATURES Location/Qualifiers
source 1..1553
/db_xref="H-InvDB:HIT000035455"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19827 IMAGE:4025017"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1553
/gene="TUBA1C"
/gene_synonym="bcm948"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
CDS 82..1431
/gene="TUBA1C"
/gene_synonym="bcm948"
/codon_start=1
/product="tubulin, alpha 1c"
/protein_id="AAH11790.1"
/db_xref="GeneID:84790"
/db_xref="HGNC:HGNC:20768"
/translation="MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGG
GDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANN
YARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD
YGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVI
SAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAT
IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLD
HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEGEEY"
BASE COUNT 356 a 417 c 388 g 392 t
ORIGIN
1 ccttggtagt ctgttagtgg gagatccttg ttgccgtccc ttcgcctcct tcaccgccgc
61 agaccccttc aagttctagt catgcgtgag tgcatctcca tccacgttgg ccaggctggt
121 gtccagattg gcaatgcctg ctgggagctc tactgcctgg aacacggcat ccagcccgat
181 ggccagatgc caagtgacaa gaccattggg ggaggagatg attccttcaa caccttcttc
241 agtgaaacgg gtgctggcaa gcatgtgccc cgggcagtgt ttgtagactt ggaacccaca
301 gtcattgatg aagttcgcac tggcacttac cgccagctct tccaccctga gcaactcatc
361 acaggcaagg aagatgctgc caataactat gcccgagggc actacaccat tggcaaggag
421 atcattgacc tcgtgttgga ccgaattcgc aagctggctg accagtgcac cggtcttcag
481 ggcttcttgg ttttccacag ctttggtggg ggaactggtt ctgggttcac ctcgctgctc
541 atggaacgtc tctcagttga ttatggcaag aagtccaagc tggagttctc catttacccg
601 gcgccccagg tttccacagc tgtagttgag ccctacaact ccatcctcac cacccacacc
661 accctggagc actctgattg tgccttcatg gtagacaatg aggccatcta tgacatctgt
721 cgtagaaacc tcgatatcga gcgcccaacc tacactaacc ttaaccgcct tattagccag
781 attgtgtcct ccatcactgc ttccctgaga tttgatggag ccctgaatgt tgacctgaca
841 gaattccaga ccaacctggt gccctacccc cgcatccact tccctctggc cacatatgcc
901 cctgtcatct ctgctgagaa agcctaccac gaacagctta ctgtagcaga gatcaccaat
961 gcttgctttg agccagccaa ccagatggtg aaatgtgacc ctcgccatgg taaatacatg
1021 gcttgctgcc tgttataccg tggtgacgtg gttcccaaag atgtcaatgc tgccattgcc
1081 accatcaaaa ccaagcgtac catccagttt gtggattggt gccccactgg cttcaaggtt
1141 ggcattaatt accagcctcc cactgtggtg cctggcggag acctggccaa ggtacagaga
1201 gctgtgtgca tgctgagcaa taccacagct gttgccgagg cctgggctcg cctggaccac
1261 aagtttgacc tgatgtatgc caagcgtgcc tttgttcact ggtacgtggg tgaggggatg
1321 gaggaaggcg agttttcaga ggcccgtgag gacatggctg cccttgagaa ggattatgag
1381 gaggttggag cagatagtgc tgacggagag gatgagggtg aagagtatta acctgtgtgc
1441 tgtactttta cactcctttg tcttggaact gtcttatttt tgttctgtaa atgtctattg
1501 ccgtaaattg ttaataaaat tgatgtttcc attttaaaaa aaaaaaaaaa aaa
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