LOCUS       BC011788                1286 bp    mRNA    linear   HUM 11-SEP-2007
DEFINITION  Homo sapiens PRP40 pre-mRNA processing factor 40 homolog A (S.
            cerevisiae), mRNA (cDNA clone IMAGE:4026200), partial cds.
ACCESSION   BC011788
VERSION     BC011788.2
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1286)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (30-JUL-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC011788.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC/DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 27 Row: l Column: 16
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Similarity but not
            identity to protein.
FEATURES             Location/Qualifiers
     source          1..1286
                     /db_xref="H-InvDB:HIT000087705"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:4026200"
                     /tissue_type="Skin, melanotic melanoma."
                     /clone_lib="NIH_MGC_20"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..>1286
                     /gene="PRPF40A"
                     /gene_synonym="FBP-11"
                     /gene_synonym="FBP11"
                     /gene_synonym="FLAF1"
                     /gene_synonym="HIP10"
                     /gene_synonym="HYPA"
                     /gene_synonym="NY-REN-6"
                     /db_xref="GeneID:55660"
                     /db_xref="HGNC:HGNC:16463"
     CDS             52..>1286
                     /gene="PRPF40A"
                     /gene_synonym="FBP-11"
                     /gene_synonym="FBP11"
                     /gene_synonym="FLAF1"
                     /gene_synonym="HIP10"
                     /gene_synonym="HYPA"
                     /gene_synonym="NY-REN-6"
                     /codon_start=1
                     /product="PRPF40A protein"
                     /protein_id="AAH11788.1"
                     /db_xref="GeneID:55660"
                     /db_xref="HGNC:HGNC:16463"
                     /translation="MRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHGMMP
                     QMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKS
                     MWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNS
                     QTKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVP
                     TTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSASNTVSGTVPVVPEPEV
                     TSIVATVVDNENTVTISTEEQAQLTSTPAIQDQSVEVSSNTGEETSKQETVADFTPKK
                     EEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKL
                     SEKKQAFNAYKVQTKKKKK"
BASE COUNT          429 a          282 c          300 g          275 t
ORIGIN      
        1 gttggtatgt gtagcggcag tggccgccgg cggagcagtc tgagcccgac gatgaggccg
       61 gggacgggag ctgagcgtgg aggcctcatg atggggcacc ctggcatgca ttatgcccca
      121 atgggaatgc accctatggg tcagagagcg aatatgcctc ctgtacctca tggaatgatg
      181 ccgcagatga tgccccctat gggagggcca ccaatgggac aaatgcctgg aatgatgtcg
      241 tcagtaatgc ctggaatgat gatgtctcat atgtctcagg cttccatgca gcctgcctta
      301 ccgccaggag taaatagtat ggatgtagca gcaggtacag catctggtgc aaaatcaatg
      361 tggactgaac ataaatcacc tgatggaagg acttactact acaacactga aaccaaacag
      421 tctacctggg agaaaccaga tgatcttaaa acacctgctg agcaactctt atctaaatgc
      481 ccctggaagg aatacaaatc agattctgga aagccttact attataattc tcaaacaaaa
      541 gaatctcgct gggccaaacc taaagaactt gaggatcttg aaggatacca gaataccatt
      601 gttgctggaa gtcttattac aaaatcaaac ctgcatgcaa tgatcaaagc tgaagaaagc
      661 agtaagcaag aagagtgcac cacaacatca acagccccag tccctacaac agaaattccg
      721 accacaatga gcaccatggc tgctgccgaa gcagcagctg ctgttgttgc agcagcagca
      781 gcggcagcag cagcagcagc tgcagccaat gctaatgctt ccacttctgc ttctaatact
      841 gtcagtggaa ctgttccagt tgttcctgag cctgaagtta cttccattgt tgctactgtt
      901 gtagataatg agaatacagt aactatttca actgaggaac aagcacaact tactagtacc
      961 cctgctattc aggatcaaag tgtggaagta tccagtaata ctggagaaga aacatctaag
     1021 caagaaactg tagctgattt tactcccaaa aaagaagagg aggagagcca accagcaaag
     1081 aaaacataca cttggaatac aaaggaagag gcaaagcaag cttttaaaga attattgaaa
     1141 gaaaagcggg taccatcgaa tgcttcatgg gagcaggcta tgaaaatgat tattaatgat
     1201 ccacgataca gtgctttggc aaagttaagt gaaaaaaagc aagcctttaa tgcctataaa
     1261 gtccagacaa aaaaaaaaaa aaaaaa
//