LOCUS BC011777 1997 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1, mRNA (cDNA clone MGC:19770 IMAGE:3640162), complete cds. ACCESSION BC011777 VERSION BC011777.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1997) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1997) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: h Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4759139. FEATURES Location/Qualifiers source 1..1997 /db_xref="H-InvDB:HIT000035445" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19770 IMAGE:3640162" /tissue_type="Pancreas, adenocarcinoma" /clone_lib="NIH_MGC_39" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1997 /gene="SLC9A3R1" /gene_synonym="EBP50" /gene_synonym="NHERF" /db_xref="GeneID:9368" /db_xref="HGNC:HGNC:11075" /db_xref="MIM:604990" CDS 205..1281 /gene="SLC9A3R1" /gene_synonym="EBP50" /gene_synonym="NHERF" /codon_start=1 /product="solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1" /protein_id="AAH11777.1" /db_xref="GeneID:9368" /db_xref="HGNC:HGNC:11075" /db_xref="MIM:604990" /translation="MSADAAAGAPLPRLCCLEKGPNGYGFHLHGEKGKLGQYIRLVEP GSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETDEQLQKL GVQVREELLRAQEAPGQAEPPAAAEVQGAGNENEPREADKSHPEQRELRPRLCTMKKG PSGYGFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSA IRAGGDETKLLVVDRETDEFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEA ALESPRPALVRSASSDTSEELNSQDSPPKQDSTAPSSTSSSDPILDFNISLAMAKERA HQKRSSKRAPQMDWSKKNELFSNL" BASE COUNT 419 a 625 c 591 g 362 t ORIGIN 1 gcacgagggg tctgtggtcc tctctcggct cctcgcggct cgcggcggcc gacggttcct 61 gggacacctg cttgcttggc ccgtccggcg gctcagggct tctctgctgc gctcccggtt 121 cgctggacgg gaagaagggc tgggccgtcc cgtcccgtcc ccatcggaac cccaagtcgc 181 gccgctgacc cgtcgcaggg cgagatgagc gcggacgcag cggccggggc gcccctgccc 241 cggctctgct gcctggagaa gggtccgaac ggctacggct tccacctgca cggggagaag 301 ggcaagttgg gccagtacat ccggctggtg gagcccggct cgccggccga gaaggcgggg 361 ctgctggcgg gggaccggct ggtggaggtg aacggcgaaa acgtggagaa ggagacccac 421 cagcaggtgg tgagccgcat ccgcgccgca ctcaacgccg tgcgcctgct ggtggtcgac 481 cccgagacgg acgagcagct gcagaagctc ggcgtccagg tccgagagga gctgctgcgc 541 gcccaggaag cgccggggca ggccgagccg ccggccgccg ccgaggtgca gggggctggc 601 aacgaaaatg agcctcgcga ggccgacaag agccacccgg agcagcgcga gcttcggcct 661 cggctctgta ccatgaagaa gggccccagt ggctatggct tcaacctgca cagcgacaag 721 tccaagccag gccagttcat ccggtcagtg gacccagact ccccggctga ggcttcaggg 781 ctccgggccc aggatcgcat tgtggaggtg aacggggtct gcatggaggg gaagcagcat 841 ggggacgtgg tgtccgccat cagggctggc ggggacgaga ccaagctgct ggtggtggac 901 agggaaactg acgagttctt caagaaatgc agagtgatcc catctcagga gcacctgaat 961 ggtcccctgc ctgtgccctt caccaatggg gagatacaga aggagaacag tcgtgaagcc 1021 ctggcagagg cagccttgga gagccccagg ccagccctgg tgagatccgc ctccagtgac 1081 accagcgagg agctgaattc ccaagacagc cccccaaaac aggactccac agcgccctcg 1141 tctacctcct cctccgaccc catcctagac ttcaacatct ccctggccat ggccaaagag 1201 agggcccacc agaaacgcag cagcaaacgg gccccgcaga tggactggag caagaaaaac 1261 gaactcttca gcaacctctg agcgccctgc tgccacccag tgactggcag ggccgagcca 1321 gcattccacc ccaccttttt ccttctcccc aattactccc ctgaatcaat gtacaaatca 1381 gcacccacat cccctttctt gacaaatgat ttttctagag aactatgttc ttccctgact 1441 ttagggaagg tgaatgtgtt cccgtcctcc cgcagtcaga aaggagactc tgcctccctc 1501 ctcctcactg agtgcctcat cctaccgggt gtccctttgc caccctgcct gggacatcgc 1561 tggaacctgc accatgccag gatcatggga ccaggcgaga gggcaccctc ccttcctccc 1621 ccatgtgata aatgggtcca gggctgatca aagaactctg actgcagaac tgccgctctc 1681 agtggacagg gcatctgtta tcctgagacc tgtggcagac acgtcttgtt ttcatttgat 1741 ttttgttaag agtgcagtat tgcagagtct agaggaattt ttgtttcctt gattaacatg 1801 attttcctgg ttgttacatc cagggcatgg cagtggcctc agccttaaac ttttgttcct 1861 actcccaccc tcagcgaact gggcagtacg gggagggttt ggctacccct gcccatccct 1921 gagccaggta ccaccattgt aaggaaacac tttcagaaat tcagctggtt cctccaaaaa 1981 aaaaaaaaaa aaaaaaa //