LOCUS BC011775 2261 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens non imprinted in Prader-Willi/Angelman syndrome 2,
mRNA (cDNA clone MGC:19609 IMAGE:3640970), complete cds.
ACCESSION BC011775
VERSION BC011775.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2261)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2261)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC011775.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: h Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57013271.
FEATURES Location/Qualifiers
source 1..2261
/db_xref="H-InvDB:HIT000035443"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19609 IMAGE:3640970"
/tissue_type="Pancreas, adenocarcinoma"
/clone_lib="NIH_MGC_39"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2261
/gene="NIPA2"
/gene_synonym="MGC5466"
/db_xref="GeneID:81614"
/db_xref="HGNC:HGNC:17044"
/db_xref="MIM:608146"
CDS 287..1369
/gene="NIPA2"
/gene_synonym="MGC5466"
/codon_start=1
/product="non imprinted in Prader-Willi/Angelman syndrome
2"
/protein_id="AAH11775.1"
/db_xref="GeneID:81614"
/db_xref="HGNC:HGNC:17044"
/db_xref="MIM:608146"
/translation="MSQGRGKYDFYIGLGLAMSSSIFIGGSFILKKKGLLRLARKGSM
RAGQGGHAYLKEWLWWAGLLSMGAGEVANFAAYAFAPATLVTPLGALSVLVSAILSSY
FLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIETLNEMSHKLGDPGFVVFATLVVI
VALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKGLGIAIKELFAGKPVLRHPLA
WILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTTSVLTCSAILFKEWQDMPV
DDVIGTLSGFFTIIVGIFLLHAFKDVGFSLASLPVSFRKDEKAMNGNLSNMYEVLNNN
EESLTCGIEQHTGENVSRRNGNLTAF"
BASE COUNT 610 a 447 c 506 g 698 t
ORIGIN
1 ttttcctcgg cgcttctcca tggaggaggc ggtgcgaacg gcttcagccc cgaatgctcg
61 catctcccac tggacggcga cgaaggcggt ggccgtgcga gcgcaggact gggcggcctg
121 tgtgggggtg tgagccgcgg tgcccaaggc tgcgccggcg aggggaagcc gcgcggccgg
181 ccggccgact agggtttgaa gactgcttca ttctgcctct agtaccagcg gtttctctgt
241 tctgtgatca atgtgattca caggaactcc ttaagtaaca aacgaaatga gccaggggcg
301 tggaaaatat gacttctata ttggtctggg attggctatg agctccagca ttttcattgg
361 aggaagtttc attttgaaaa aaaagggcct ccttcgactt gccaggaaag gctctatgag
421 agcaggtcaa ggtggccatg catatcttaa ggaatggttg tggtgggctg gactgctgtc
481 aatgggagct ggtgaggtgg ccaacttcgc tgcgtatgcg tttgcaccag ccactctagt
541 gactccacta ggagctctca gcgtgctagt aagtgccatt ctttcttcat actttctcaa
601 tgaaagactt aatcttcatg ggaaaattgg gtgtttgcta agtattctag gatctacagt
661 tatggtcatt catgctccaa aggaagagga gattgagact ttaaatgaaa tgtctcacaa
721 gctaggtgat ccaggttttg tggtctttgc aacccttgtg gtcattgtgg ccttgatatt
781 aatcttcgtg gtgggtcctc gccatggaca gacaaacatt cttgtgtaca taacaatctg
841 ctctgtaatc ggcgcgtttt cagtctcctg tgtgaagggc ctgggcattg ctatcaagga
901 gctgtttgca gggaagcctg tgctgcggca tcccctggct tggattctgc tgctgagcct
961 catcgtctgt gtgagcacac agattaatta cctaaatagg gccctggata tattcaacac
1021 ttccattgtg actccaatat attatgtatt ctttacaaca tcagttttaa cttgttcagc
1081 tattcttttt aaggagtggc aagatatgcc tgttgacgat gtcattggta ctttgagtgg
1141 cttctttaca atcattgtgg ggatattctt gttgcatgcc tttaaagacg tcggctttag
1201 tctagcaagt ctgcctgtgt cttttcgaaa agacgagaaa gcaatgaatg gcaatctctc
1261 taatatgtat gaagttctta ataataatga agaaagctta acctgtggaa tcgaacaaca
1321 cactggtgaa aatgtctccc gaagaaatgg aaatctgaca gctttttaag aaaggtgtaa
1381 ttaaaggtta atctgtgatt gttatgaagt gaatttgaat atcatcagaa tgtgtctgaa
1441 aaaacattgt cctcaaataa tgttctttaa aggcaatctt tttaaagatt tcactaattt
1501 ggaccaagaa attacttttc ttgtatttaa acaaacaatg gtagctcact aaaatgacct
1561 cagcacatga cgatttctat taacatttta ttgttgtaga agtattttac attttcatcc
1621 cttctccaaa agccgaatgc actaatgaca gttttaagtc tatgaaaatg ctttattttt
1681 tcattggtga tgaaagtctg aaatgtgcat ttgtcatccc cactccatca atccctgacc
1741 atgtaaggct tttttatttt aaaaaaacag agttatccca atacattatc ctgtgattta
1801 ccttacctac aaaagtggct cctgtttgtt tgatgatgat tggttttatt tttgaaatat
1861 ttattaaggg aaaactaagt tactgaatga aggaacctct ttcttacaaa acaaaaaaaa
1921 gggcagaaat caccccaagg aacgatttct caggttgaga tgatcaccgt gaatccggct
1981 tcctctgagc attcgatggc cttagcacct catcaagcca gcacatcctg cctgctgttg
2041 cagcctggct gggtttattc ttcagttacc ctaatcccat gatgcctgga accttgatta
2101 ccgttttaca tcagctcttg tacttttcag tatattttca taatgagtta tattgtcatt
2161 tagactttga acagctctgg gaaatagaag actagggttg tttcttaaat ttagctcatg
2221 ttataataaa aagttgaaat gaaaaaaaaa aaaaaaaaaa a
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