LOCUS BC011749 1804 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger, DHHC-type containing 16, mRNA (cDNA clone
MGC:19657 IMAGE:3140177), complete cds.
ACCESSION BC011749
VERSION BC011749.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1804)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1804)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011749.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: b Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..1804
/db_xref="H-InvDB:HIT000035422"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19657 IMAGE:3140177"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1804
/gene="ZDHHC16"
/gene_synonym="APH2"
/gene_synonym="MGC2993"
/db_xref="GeneID:84287"
/db_xref="HGNC:HGNC:20714"
CDS 175..1308
/gene="ZDHHC16"
/gene_synonym="APH2"
/gene_synonym="MGC2993"
/codon_start=1
/product="zinc finger, DHHC-type containing 16"
/protein_id="AAH11749.1"
/db_xref="GeneID:84287"
/db_xref="HGNC:HGNC:20714"
/translation="MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKV
CLRSLLYNSFGGSDTAVDAAFEPVYWLVDNVIRWFGVVFVVLVIVLTGSIVAIAYLCV
LPLILRTYSVPRLCWHFFYSHWNLILIVFHYYQAITTPPGYPPQGRNDIATVSICKKC
IYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGS
WDLFREAYAAIEKMKQLDKNKLQAVANQTYHQTPPPTFSFRERMTHKSLVYLWFLCSS
VALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFL
GVDTGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMAV"
BASE COUNT 390 a 512 c 484 g 418 t
ORIGIN
1 atgggctggc ggcgggtccg ggtccgctgc ctggcgctgc gggcggcggg ccatggtggt
61 ttggattgag ccgggcccgg ccggggcgcc gagtcggagg gggtggcagt gagcggcggc
121 agaggctacg gggctcggtt tggctgactg gggagtcggc aggcggcagg aaccatgcga
181 ggccagcgga gcctgctgct gggcccggcc cgcctctgcc tccgcctcct tctgctgctg
241 ggttacaggc gccgctgtcc acctctactc cggggtctag tacagcgctg gcgctacggc
301 aaggtctgcc tgcgctccct gctctacaac tcctttgggg gcagtgacac cgctgttgat
361 gctgcctttg agcctgtcta ctggctggta gacaacgtga tccgctggtt tggagtggtg
421 ttcgtggtcc tggtgatcgt gctgacaggc tccattgtag ctatcgccta cctgtgtgtc
481 ctgcctctca tcctccgaac ctactcagtg ccacgactct gctggcattt cttctatagc
541 cactggaatc tgatcctgat tgtcttccac tactaccagg ccatcaccac tccgcctggg
601 tacccacccc agggcaggaa tgatatcgcc accgtctcca tctgtaagaa gtgcatttac
661 cccaagccag cccgaacaca ccactgcagc atctgcaaca ggtgtgtgct gaagatggat
721 caccactgcc cctggctaaa caattgtgtg ggccactata accatcggta cttcttctct
781 ttctgctttt tcatgactct gggctgtgtc tactgcagct atggaagttg ggaccttttc
841 cgggaggctt atgctgccat tgagaaaatg aaacagctcg acaagaacaa actacaggcg
901 gttgccaacc agacttatca ccagacccca ccacccacct tctcctttcg agaaaggatg
961 actcacaaga gtcttgtcta cctctggttc ctgtgcagtt ctgtggcact tgccctgggt
1021 gccctaactg tatggcatgc tgttctcatc agtcgaggtg agactagcat cgaaaggcac
1081 atcaacaaga aggagagacg tcggctacag gccaagggca gagtatttag gaatccttac
1141 aactacggct gcttggacaa ctggaaggta ttcctgggtg tggatacagg aaggcactgg
1201 cttactcggg tgctcttacc ttctagtcac ttgccccatg ggaatggaat gagctgggag
1261 ccccctccct gggtgactgc tcactcagcc tctgtgatgg cagtgtgagc tggactgtgt
1321 cagccacgac tcgagcactc attctgctcc ctatgttatt tcaagggcct ccaagggcag
1381 cttttctcag aatccttgat caaaaagagc cagtgggcct gccttagggt accatgcagg
1441 acaattcaag gaccagcctt tttaccactg cagaagaaag acacaatgtg gagaaatctt
1501 aggactgaca tccctttact caggcaaaca gaagttccaa ccccagacta ggggtcaggc
1561 agctagctac ctaccttgcc cagtgctgac ccggacctcc tccaggatac agcactggag
1621 ttggccacca cctcttctac ttgctgtctg aaaaaacacc tgactagtac agctgagatc
1681 ttggcttctc aacagggcaa agataccagg cctgctgctg aggtcactgc cacttctcac
1741 atgctgctta agggagcaca aataaaggta ttcgattttt aaagataaaa aaaaaaaaaa
1801 aaaa
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