LOCUS BC011739 1127 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3C, mRNA (cDNA clone MGC:19485 IMAGE:4331363),
complete cds.
ACCESSION BC011739
VERSION BC011739.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1127)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1127)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC011739.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22907038.
FEATURES Location/Qualifiers
source 1..1127
/db_xref="H-InvDB:HIT000035415"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19485 IMAGE:4331363"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1127
/gene="APOBEC3C"
/gene_synonym="APOBEC1L"
/gene_synonym="ARDC2"
/gene_synonym="ARDC4"
/gene_synonym="ARP5"
/gene_synonym="bK150C2.3"
/gene_synonym="MGC19485"
/gene_synonym="PBI"
/db_xref="GeneID:27350"
/db_xref="HGNC:HGNC:17353"
/db_xref="MIM:607750"
CDS 104..676
/gene="APOBEC3C"
/gene_synonym="APOBEC1L"
/gene_synonym="ARDC2"
/gene_synonym="ARDC4"
/gene_synonym="ARP5"
/gene_synonym="bK150C2.3"
/gene_synonym="MGC19485"
/gene_synonym="PBI"
/codon_start=1
/product="apolipoprotein B mRNA editing enzyme, catalytic
polypeptide-like 3C"
/protein_id="AAH11739.1"
/db_xref="GeneID:27350"
/db_xref="HGNC:HGNC:17353"
/db_xref="MIM:607750"
/translation="MNPQIRNPMKAMYPGTFYFQFKNLWEANDRDETWLCFTVEGIKR
RSVVSWKTGVFRNQVDSETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAG
EVAEFLARHSNVNLTIFTARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENF
VYNDNEPFKPWKGLKTNFRLLKRRLRESLQ"
BASE COUNT 281 a 332 c 266 g 248 t
ORIGIN
1 ttaaagaggg ctgctcaact gcaaggacgc tgtaagcagg aagagaagcc acagcgcttc
61 agaaaagagt gggacaggga caagcatatc taagaggctg aacatgaatc cacagatcag
121 aaacccgatg aaggcaatgt atccaggcac attctacttc caatttaaaa acctatggga
181 agccaacgat cgggacgaaa cttggctgtg cttcaccgtg gaaggtataa agcgccgctc
241 agttgtctcc tggaagacgg gcgtcttccg aaaccaggtg gattctgaga cccattgtca
301 tgcagaaagg tgcttcctct cttggttctg cgacgacata ctgtctccta acacaaagta
361 ccaggtcacc tggtacacat cttggagccc ttgcccagac tgtgcagggg aggtggccga
421 gttcctggcc aggcacagca acgtgaatct caccatcttc accgcccgcc tctactactt
481 ccagtatcca tgttaccagg aggggctccg cagcctgagt caggaagggg tcgctgtgga
541 gatcatggac tatgaagatt ttaaatattg ttgggaaaac tttgtgtaca atgataatga
601 gccattcaag ccttggaagg gattaaaaac caactttcga cttctgaaaa gaaggctacg
661 ggagagtctc cagtgagggg tctccctggg cctcatggtc tgtctcctct agcctcctgc
721 tcatgctgca cgggcctccc ctccaccctg gacccgctct gtttctgcct ggtcatcctg
781 agcccctcct ggcctcaggg ccattccaca gtgctcccct gcctcaccgc ttcctcctcg
841 ctcttccaga ctcttcctgc agaggctcct ttctgcctcc atggctatcc atccaccccc
901 acagaccccg ttcctccagc ctgcgtgccc ctaacctggc ttttcccatc tccccagcat
961 aaccaaatct tactaaactc atcctaggct gggcatggtg actcacgcct gtaatccccc
1021 agcaatttgg gaggcaaagg tgggagaatc gcgtgagccc aggagttcca gaccaggctg
1081 ggtcacatga caaagcccca tctctacaaa aaaaaaaaaa aaaaaaa
//