LOCUS BC011714 1734 bp mRNA linear HUM 03-NOV-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein D-like, mRNA
(cDNA clone MGC:19802 IMAGE:3929324), complete cds.
ACCESSION BC011714
VERSION BC011714.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1734)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1734)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC011714.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: j Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14110410.
FEATURES Location/Qualifiers
source 1..1734
/db_xref="H-InvDB:HIT000035397"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19802 IMAGE:3929324"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1734
/gene="HNRPDL"
/gene_synonym="HNRNP"
/gene_synonym="JKTBP"
/gene_synonym="JKTBP2"
/gene_synonym="laAUF1"
/db_xref="GeneID:9987"
/db_xref="HGNC:HGNC:5037"
/db_xref="MIM:607137"
CDS 177..1439
/gene="HNRPDL"
/gene_synonym="HNRNP"
/gene_synonym="JKTBP"
/gene_synonym="JKTBP2"
/gene_synonym="laAUF1"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein D-like"
/protein_id="AAH11714.1"
/db_xref="GeneID:9987"
/db_xref="HGNC:HGNC:5037"
/db_xref="MIM:607137"
/translation="MEVPPRLSHVPPPLFPSAPATLASRSLSHWRPRPPRQLAPLLPS
LAPSSARQGARRAQRHVTAQQPSRLAGGAAIKGGRRRRPDLFRRHFKSSSIQRSAAAA
AATRTARQHPPADSSVTMEDMNEYSNIEEFAEGSKINASKNQQDDGKMFIGGLSWDTS
KKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDAASVDKVLELKEHKLDGKLI
DPKRAKALKGKEPPKKVFVGGLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGF
CFITYTDEEPVKKLLESRYHQIGSGKCEIKVAQPKEVYRQQQQQQKGGRGAAAGGRGG
TRGRGRGQGQNWNQGFNNYYDQGYGNYNSAYGGDQNYSGYGGYDYTGYNYGNYGYGQG
YADYSGQQSTYGKASRGGGNHQNNYQPY"
BASE COUNT 486 a 404 c 436 g 408 t
ORIGIN
1 ccggacgcca gagacaaagg ctcccaaggc aagagggact gtggccctgc gtcggctctg
61 ctcggaactg ctgaccccag gaatttacgc cccttcgttt ttctcttctg attcttctct
121 tctcccaagc ccgcgtcccc tcacgcgtgg cctctctcct tgccgggagg gccgcgatgg
181 aggtcccgcc caggctttcc catgtgccgc cgccattgtt cccctccgct cccgctactt
241 tagcctcccg cagcctctcc cattggcggc cgcggccgcc gcggcagcta gccccgctcc
301 tcccttcgct cgctcccagc tccgcccggc agggggcgcg ccgggcccag cgccacgtca
361 ccgcccagca gccctcccga ttggcgggcg gggcggctat aaagggaggg cgcaggcggc
421 gcccggatct cttccgccgc cattttaaat ccagctccat acaacgctcc gccgccgctg
481 ctgccgcgac ccggactgcg cgccagcacc cccctgccga cagctccgtc actatggagg
541 atatgaacga gtacagcaat atagaggaat tcgcagaggg atccaagatc aacgcgagca
601 agaatcagca ggatgacggt aaaatgttta ttggaggctt gagctgggat acaagcaaaa
661 aagatctgac agagtacttg tctcgatttg gggaagttgt agactgcaca attaaaacag
721 atccagtcac tgggagatca agaggatttg gatttgtgct tttcaaagat gctgctagtg
781 ttgataaggt tttggaactg aaagaacaca aactggatgg caaattgata gatcccaaaa
841 gggccaaagc tttaaaaggg aaagaacctc ccaaaaaggt ttttgtgggt ggattgagcc
901 cggatacttc tgaagaacaa attaaagaat attttggagc ctttggagag attgaaaata
961 ttgaacttcc catggataca aaaacaaatg aaagaagagg attttgtttt atcacatata
1021 ctgatgaaga gccagtaaaa aaattgttag aaagcagata ccatcaaatt ggttctggga
1081 agtgtgaaat caaagttgca caacccaaag aggtatatag gcagcaacag caacaacaaa
1141 aaggtggaag aggtgctgca gctggtggac gaggtggtac gaggggtcgt ggccgaggtc
1201 agggccaaaa ctggaaccaa ggatttaata actattatga tcaaggatat ggaaattaca
1261 atagtgccta tggtggtgat caaaactata gtggctatgg cggatatgat tatactgggt
1321 ataactatgg gaactatgga tatggacagg gatatgcaga ctacagtggc caacagagca
1381 cttatggcaa ggcatctcga gggggtggca atcaccaaaa caattaccag ccatactaaa
1441 ggagaacatt ggagaaaaca ggaggagatg ttaaagtaac ccatcttgca ggacgacatt
1501 gaagattggt cttctgttga tctaagatga ttattttgta aaagactttc tagtgtacaa
1561 gacaccattg tgtccaactg tatatagctg ccaattagtt ttctttgttt ttactttgtc
1621 ctttgctatc tgtgttatga ctcaatgtgg atttgtttat acacatttta tttgtatcat
1681 ttcatgttaa acctcaaata aatgcttcct tatgtgaaaa aaaaaaaaaa aaaa
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