LOCUS BC011698 2427 bp mRNA linear HUM 15-SEP-2004
DEFINITION Homo sapiens tetratricopeptide repeat domain 19, mRNA (cDNA clone
IMAGE:3530508), partial cds.
ACCESSION BC011698
VERSION BC011698.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2427)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2427)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC011698.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: d Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22547158.
FEATURES Location/Qualifiers
source 1..2427
/db_xref="H-InvDB:HIT000035382"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3530508"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2427
/gene="TTC19"
/gene_synonym="2010204O13Rik"
/gene_synonym="FLJ20343"
/gene_synonym="MGC19520"
/db_xref="GeneID:54902"
CDS <1..1151
/gene="TTC19"
/gene_synonym="2010204O13Rik"
/gene_synonym="FLJ20343"
/gene_synonym="MGC19520"
/codon_start=3
/product="TTC19 protein"
/protein_id="AAH11698.2"
/db_xref="GeneID:54902"
/translation="GSMFRLLSWSLGRGFLRAAGRRCRGCSARLLPGLAGGPGPEVQV
PPSRVAPHGRGPGLLPLLAALAWFSRPAAAEEEEQQGADGAAAEDGADEAEAEIIQLL
KRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQLENAEQL
FKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKIERE
KELAEDIMSVEEKANTHLLLGMCLDACARYLLFSKQPSQAQRMYEKALQISEEIQGER
HPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDLARQINHPELHMVLSNLAAVLMHRE
RYTQAKEIYQEALKQAKLKKDEISVQHIREELAELSKKSRPLTNSVKL"
BASE COUNT 678 a 498 c 600 g 651 t
ORIGIN
1 gcgggagcat gttccggctc ctgagctgga gcctgggccg aggcttcctg cgggccgcgg
61 ggcggcggtg ccggggctgc tccgcgcgcc tgctcccggg gctggcagga ggtccggggc
121 ccgaggtgca ggtgccgcca tcccgagtcg cgccgcacgg ccggggccca ggcctgctgc
181 cgctgctggc agcgctcgcc tggttctcga ggcccgctgc ggcagaggag gaggagcagc
241 agggagccga cggggccgct gccgaggacg gggcggacga ggccgaggca gagatcatcc
301 agctgctgaa gcgagccaag ttgagcatta tgaaagatga gccagaagag gctgagttaa
361 ttttgcatga cgctcttcgt ctcgcctatc agactgataa caagaaggcc atcacttaca
421 cttatgattt gatggccaac ttagcattta tacggggtca gcttgaaaat gctgaacaac
481 tttttaaagc aacaatgagt tacctccttg gagggggcat gaagcaggag gacaatgcaa
541 taattgaaat ttccctaaag ctggccagta tctatgctgc gcagaacaga caggaatttg
601 ctgttgctgg ctatgaattc tgcatttcaa ctctagagga aaaaattgaa agagaaaagg
661 aattagcaga agacattatg tcagtggaag agaaagccaa tacccacctc ctcttgggca
721 tgtgcttaga cgcctgtgct cgctaccttc tgttctccaa gcagccgtca caggcacaaa
781 ggatgtatga aaaagctctg cagatttctg aagaaataca aggagaaaga cacccacaga
841 ccattgtgct gatgagtgac ctggctacta ccctggatgc acagggccgc tttgatgagg
901 cctatattta tatgcaaagg gcatcagatc tggcaagaca gataaatcat cctgagctac
961 acatggtact cagtaatcta gctgcagttt tgatgcacag agaacgatat acacaagcaa
1021 aagagatcta ccaggaagca ctgaagcaag caaagctgaa aaaagatgaa atttctgtac
1081 aacacatcag ggaagagttg gctgagctgt caaagaaaag tagacctttg acaaattctg
1141 tcaagctcta aatccatttt tgtgtaggga gaataatgtc tagtaatgtg gaagaatagc
1201 tatcattcct gtctctgtgg cacccgatca atggcttaaa tctgtcgttt ttgatattca
1261 ggtttcctca atttagcctt agtgaaggag gggttgtaca cactgccatt tttgtatttt
1321 aaaggaaaaa tgactttcat tcccaactga ttatgacctt tcaggatgtc gtcaagtgat
1381 gctttcagtt gtaacacgtg acttggtgct gtccctgctg gtctaagtag aactgtagat
1441 tcatatgggc tggtgttcct gtgcgctgtg ggtgtggtga ttcagcctgg catttctacc
1501 ataagttttt ggtctgctga tttgctgccc tgtcttctct tactttactt tatcaatacc
1561 tggcaaactg accagaatta ccttcctcat ggcaaagggg gattatggtg aattgttgtt
1621 cttatagtct gtttcatgaa gcacaagtgg aatttaatac ataaaagaga aaaatatctt
1681 agtttgctac cagcatccag catgaagttg taaagtgggg attaggcacg tgacagtata
1741 gcacccattt gaatttaaat aaaagtgaac catatttatc tggttatata aaactaaaaa
1801 tgggggtgtt tatataaaac taaaaactaa gaatgatgta accttttgtc tgtgttatct
1861 gaacactcta cttcctttgc agccttagtc acacaactga gtcatctcaa gtactcttta
1921 aggacacaca gcccaggctg ttctgagtca gaataggccc ctacaggtat attttaaaac
1981 tcttcgtaat tctaatgtgt actgctggta tagctgaact actgacctgg atcttagtcc
2041 tagccttttt gcttttgcaa tttcagtatc ttcatctcta aactagggaa acactgggat
2101 tctttcttag ctgtggggga aggtatttgg ttagatgact ttgaatgaat agactgctgt
2161 gctgaaagag ctttatcaca ctgtctcaaa gtatgtaaag atacataggt ggatgctctt
2221 actgcagcag tcatgaatac atttttagcc atttacctaa ggaaaaagac agtttttcta
2281 ggtaccatga aggaagattg accctgttgg tatgcctgtg ggggtgggat gtgagtggga
2341 ctgatactga tacttttggt tcgtatgtac atactggaag aatcttcata ataaatgaga
2401 ctacacaaca aaaaaaaaaa aaaaaaa
//