LOCUS BC011597 612 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens trophinin associated protein (tastin), mRNA (cDNA
clone IMAGE:3347740), complete cds.
ACCESSION BC011597
VERSION BC011597.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 612)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 612)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC011597.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: j Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4885624
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..612
/db_xref="H-InvDB:HIT000087668"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3347740"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..612
/gene="TROAP"
/gene_synonym="TASTIN"
/db_xref="GeneID:10024"
/db_xref="MIM:603872"
CDS 36..470
/gene="TROAP"
/gene_synonym="TASTIN"
/codon_start=1
/product="TROAP protein"
/protein_id="AAH11597.1"
/db_xref="GeneID:10024"
/db_xref="MIM:603872"
/translation="MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQEN
QDPRRWVQKPPLNIQRPLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQ
NVGPGPPAQTVLVPAPGKLFALRRSPFPPAKCHLARCHGLYL"
BASE COUNT 173 a 175 c 152 g 112 t
ORIGIN
1 gctgggtagg ccctgagggg cctcggtaag ccatcatgac cacccggcaa gccacgaagg
61 atcccctcct ccggggtgta tctcctaccc ctagcaagat tccggtacgc tctcagaaac
121 gcacgccttt ccccactgtt acatcgtgcg ccgtggacca ggagaaccaa gatccaagga
181 gatgggtgca gaaaccaccg ctcaatattc aacgccccct cgttgattca gcaggcccca
241 ggccgaaagc caggcaccag gcagagacat cacaaagatt ggtggggatc agtcagcctc
301 ggaacccctt ggaagagctc aggcctagcc ctaggggtca aaatgtgggg cctgggcccc
361 ctgcccagac agtcctggtc ccagctcctg gaaagctctt tgctcttaga agatctccct
421 ttcctccagc aaaatgtcat ctcgccaggt gccatggctt gtacctgtaa tcacagctac
481 tcaggaggct gaagcaggag gatcactgga ggccaggagt tggagaccag cctggatgac
541 agagggagat cccatctctt taaaaaataa ataaataaat aaataataaa tatcaaaaaa
601 aaaaaaaaaa aa
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