LOCUS BC011591 1537 bp mRNA linear HTC 19-NOV-2003
DEFINITION Homo sapiens ankyrin repeat domain 5, mRNA (cDNA clone
IMAGE:4553772), with apparent retained intron.
ACCESSION BC011591
VERSION BC011591.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1537)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1537)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314696
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1537
/db_xref="H-InvDB:HIT000087666"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4553772"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 454 a 330 c 401 g 352 t
ORIGIN
1 ccctgctgtc ccgcgcgcca gctcaccagc cctacccaag ggacatcatt cacgcctggg
61 cgcctccgcc gggctccggg agcccaaggt cgcggctggg ccagcgctga gcgtcagagg
121 acgagagcag gggcctcccc ggtcgcccca gcaggcccag gcacataggt gcccagagat
181 ccctggcttc tgatcgcccg gaagactaag agctttagtt ttggtccaga aagcattttc
241 aaggagctgg tcaagcatgg ctttagcaga taagagactt gagaacttac agatctacaa
301 agttcttcaa tgtgtgcgga acaaagacaa gaagcagata gagaagctga ccaagcttgg
361 ataccctgaa ctaatcaatt atacagaacc cattaatgga cttagtgctt tgcacttagc
421 ctcagtttcc aatgatattg atatggtcag ctttctcctt gaccttggtg ctcaccctga
481 tgtgcaagac cgaatgggct gtactcccac aatgagggct gcagaactgg gccatgaatt
541 gtcaatggaa atattagcaa aggcaaaggc tgatatgact atagttgata atgaaggaaa
601 aggtgttttg ttttactgca ttttaccgac taagcggcat tatcgctgtg ctctgatcgc
661 ccttgaacat ggtgcagatg tcaacaattc tacctatgaa ggaaagccaa tattccttag
721 agcttgtgaa gatgcacatg atgttaaaga tgtgtgcctg acatttttgg aaaaaggagc
781 caatcctaat gcaatcaact catccacagg ccgcacagct ttaatggaag cgtcaagaga
841 aggggtagtg gaaatagttc gaggcatatt ggaaagagga ggtgaagtga atgcatttga
901 caacgacagg catcacgctg ctcattttgc tgctaaagga ggctttttcg atatattgaa
961 gcttcttttt gcctacaatg gagacgtggg gctgatttcg ataaatggga acacaccact
1021 tcattatgct gccatgggtg gttttgcaga ctgctgtaaa tatatagctc agcgaggatg
1081 tgacctgaaa tggaagaatt tagatcataa aacgcccagg gctgtggcta aggaaggcgg
1141 cttcaaagca gcaagcaaag aaatacgccg agcagagaga atcgctaata aactagccag
1201 gccaggagcc aaaaatccaa atccactgtg ggcccttaga ctgcacgatt ggtccgtaga
1261 acgtgaggct ttcctccggg aagcctttgc ggttttagac aggggtgatg gaagcatcag
1321 caagaacgac ttcgtgatgg tgttggagga aaggcaggat tatgcaagct cagaacagct
1381 ggctgccatc gctcaccttc atgagaaaac ccggggagga ggggtcaata ttaatgaatt
1441 ctttaaagga accagatatt taaacaagtc ttttgtctta ggatcgtatg gacctaagaa
1501 aaaggaaaaa gggatgggca aaaaaaaaaa aaaaaaa
//