LOCUS BC011587 2170 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens major facilitator superfamily domain containing 2,
mRNA (cDNA clone MGC:20425 IMAGE:4646430), complete cds.
ACCESSION BC011587
VERSION BC011587.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2170)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2170)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42713695.
FEATURES Location/Qualifiers
source 1..2170
/db_xref="H-InvDB:HIT000035312"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20425 IMAGE:4646430"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2170
/gene="MFSD2"
/gene_synonym="FLJ14490"
/gene_synonym="FP1147"
/gene_synonym="HMFN0656"
/gene_synonym="PP10484"
/gene_synonym="RP3-342P20.1"
/db_xref="GeneID:84879"
/db_xref="HGNC:HGNC:25897"
CDS 156..1748
/gene="MFSD2"
/gene_synonym="FLJ14490"
/gene_synonym="FP1147"
/gene_synonym="HMFN0656"
/gene_synonym="PP10484"
/gene_synonym="RP3-342P20.1"
/codon_start=1
/product="major facilitator superfamily domain containing
2"
/protein_id="AAH11587.1"
/db_xref="GeneID:84879"
/db_xref="HGNC:HGNC:25897"
/translation="MAKGEGAESGSAAGLLPTSILQSTERPAQVKKEPKKKKQQLSVC
NKLCYALGGAPYQVTGCALGFFLQIYLLDVAQVGPFSASIILFVGRAWDAITDPLVGL
CISKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYWYLLFYCLFETMVTC
FHVPYSALTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVGQADTPCFQDLNS
STVASQSANHTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGVREQREPYEAQQS
EPIAYFRGLRLVMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLL
AIMLSATLTIPIWQWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIITYAVAVAAG
ISVAAAFLLPWSMLPDVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLGISTLSL
DFAGYQTRGCSQPERVKFTLNMLVTMAPIVLILLGLLLFKMYPIDEERRRQNKKALQA
LRDEASSSGCSETDSTELASIL"
BASE COUNT 474 a 625 c 566 g 505 t
ORIGIN
1 gtgcagcaga gtgcgttcct cgtctgccag ccggcttggc tagcgcgcgg cggccgtggc
61 taaggctgct acgaagcgag cttgggagga gcagcggcct gcggggcaga ggagcatccc
121 gtctaccagg tcccaagcgg cgtggcccgc gggtcatggc caaaggagaa ggcgccgaga
181 gcggctccgc ggcggggctg ctacccacca gcatcctcca aagcactgaa cgcccggccc
241 aggtgaagaa agaaccgaaa aagaagaaac aacagttgtc tgtttgcaac aagctttgct
301 atgcacttgg gggagccccc taccaggtga cgggctgtgc cctgggtttc ttccttcaga
361 tctacctatt ggatgtggct caggtgggcc ctttctctgc ctccatcatc ctgtttgtgg
421 gccgagcctg ggatgccatc acagaccccc tggtgggcct ctgcatcagc aaatccccct
481 ggacctgcct gggtcgcctt atgccctgga tcatcttctc cacgcccctg gccgtcattg
541 cctacttcct catctggttc gtgcccgact tcccacacgg ccagacctat tggtacctgc
601 ttttctattg cctctttgaa acaatggtca cgtgtttcca tgttccctac tcggctctca
661 ccatgttcat cagcaccgag cagactgagc gggattctgc caccgcctat cggatgactg
721 tggaagtgct gggcacagtg ctgggcacgg cgatccaggg acaaatcgtg ggccaagcag
781 acacgccttg tttccaggac ctcaatagct ctacagtagc ttcacaaagt gccaaccata
841 cacatggcac cacctcacac agggaaacgc aaaaggcata cctgctggca gcgggggtca
901 ttgtctgtat ctatataatc tgtgctgtca tcctgatcct gggcgtgcgg gagcagagag
961 aaccctatga agcccagcag tctgagccaa tcgcctactt ccggggccta cggctggtca
1021 tgagccacgg cccatacatc aaacttatta ctggcttcct cttcacctcc ttggctttca
1081 tgctggtgga ggggaacttt gtcttgtttt gcacctacac cttgggcttc cgcaatgaat
1141 tccagaatct actcctggcc atcatgctct cggccacttt aaccattccc atctggcagt
1201 ggttcttgac ccggtttggc aagaagacag ctgtatatgt tgggatctca tcagcagtgc
1261 catttctcat cttggtggcc ctcatggaga gtaacctcat cattacatat gcggtagctg
1321 tggcagctgg catcagtgtg gcagctgcct tcttactacc ctggtccatg ctgcctgatg
1381 tcattgacga cttccatctg aagcagcccc acttccatgg aaccgagccc atcttcttct
1441 ccttctatgt cttcttcacc aagtttgcct ctggagtgtc actgggcatt tctaccctca
1501 gtctggactt tgcagggtac cagacccgtg gctgctcgca gccggaacgt gtcaagttta
1561 cactgaacat gctcgtgacc atggctccca tagttctcat cctgctgggc ctgctgctct
1621 tcaaaatgta ccccattgat gaggagaggc ggcggcagaa taagaaggcc ctgcaggcac
1681 tgagggacga ggccagcagc tctggctgct cagaaacaga ctccacagag ctggctagca
1741 tcctctaggg cccgccacgt tgcccgaagc caccatgcag aaggccacag aagggatcag
1801 gacctgtctg ccggcttgct gagcagctgg actgcaggtg ctaggaaggg aactgaagac
1861 tcaaggaggt ggcccaggac acttgctgtg ctcactgtgg ggccggctgc tctgtggcct
1921 cctgcctccc ctctgcctgc ctgtggggcc aagccctggg gctgccactg tgaatatgcc
1981 aaggactgat cgggcctagc ccggaacact aatgtagaaa cctttttttt acagagccta
2041 attaataact taatgactgt gtacatagca atgtgtgtgt atgtatatgt ctgtgagcta
2101 ttaatgttat taattttcat aaaagctgga aagcaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa
//