LOCUS BC011568 1623 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SIL1 homolog, endoplasmic reticulum chaperone (S.
cerevisiae), mRNA (cDNA clone MGC:20202 IMAGE:4640182), complete
cds.
ACCESSION BC011568
VERSION BC011568.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1623)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1623)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: k Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543622.
FEATURES Location/Qualifiers
source 1..1623
/db_xref="H-InvDB:HIT000035296"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20202 IMAGE:4640182"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1623
/gene="SIL1"
/gene_synonym="BAP"
/db_xref="GeneID:64374"
/db_xref="HGNC:HGNC:24624"
/db_xref="MIM:608005"
CDS 87..1472
/gene="SIL1"
/gene_synonym="BAP"
/codon_start=1
/product="SIL1 homolog, endoplasmic reticulum chaperone
(S. cerevisiae)"
/protein_id="AAH11568.1"
/db_xref="GeneID:64374"
/db_xref="HGNC:HGNC:24624"
/db_xref="MIM:608005"
/translation="MAPQSLPSSRMAPLGMLLGLLMAACFTFCLSHQNLKEFALTNPE
KSSTKETERKETKAEEELDAEVLEVFHPTHEWQALQPGQAVPAGSHVRLNLQTGEREA
KLQYEDKFRNNLKGKRLDINTNTYTSQDLKSALAKFKEGAEMESSKEDKARQAEVKRL
FRPIEELKKDFDELNVVIETDMQIMVRLINKFNSSSSSLEEKIAALFDLEYYVHQMDN
AQDLLSFGGLQVVINGLNSTEPLVKEYAAFVLGAAFSSNPKVQVEAIEGGALQKLLVI
LATEQPLTAKKKVLFALCSLLRHFPYAQRQFLKLGGLQVLRTLVQEKGTEVLAVRVVT
LLYDLVTEKMFAEEEAELTQEMSPEKLQQYRQVHLLPGLWEQGWCEITAHLLALPEHD
AREKVLQTLGVLLTTCRDRYRQDPQLGRTLASLQAEYQVLASLELQDGEDEGYFQELL
GSVNSLLKELR"
BASE COUNT 388 a 429 c 506 g 300 t
ORIGIN
1 gaatcggcac gagggccgcc gcggccgcct ggaattgtgg gagttgtgtc tgccactcgg
61 ctgccggagg ccgaaggtcc ctgactatgg ctccccagag cctgccttca tctaggatgg
121 ctcctctggg catgctgctt gggctgctga tggccgcctg cttcaccttc tgcctcagtc
181 atcagaacct gaaggagttt gccctgacca acccagagaa gagcagcacc aaagaaacgg
241 agagaaaaga aaccaaagcc gaggaggagc tggatgccga agtcctggag gtgttccacc
301 cgacgcatga gtggcaggcc cttcagccag ggcaggctgt ccctgcagga tcccacgtac
361 ggctgaatct tcagactggg gaaagagagg caaaactcca atatgaggac aagttccgaa
421 ataatttgaa aggcaaaagg ctggatatca acaccaacac ctacacatct caggatctca
481 agagtgcact ggcaaaattc aaggaggggg cagagatgga gagttcaaag gaagacaagg
541 caaggcaggc tgaggtaaag cggctcttcc gccccattga ggaactgaag aaagactttg
601 atgagctgaa tgttgtcatt gagactgaca tgcagatcat ggtacggctg atcaacaagt
661 tcaatagttc cagctccagt ttggaagaga agattgctgc gctctttgat cttgaatatt
721 atgtccatca gatggacaat gcgcaggacc tgctttcctt tggtggtctt caagtggtga
781 tcaatgggct gaacagcaca gagcccctcg tgaaggagta tgctgcgttt gtgctgggcg
841 ctgccttttc cagcaacccc aaggtccagg tggaggccat cgaaggggga gccctgcaga
901 agctgctggt catcctggcc acggagcagc cgctcactgc aaagaagaag gtcctgtttg
961 cactgtgctc cctgctgcgc cacttcccct atgcccagcg gcagttcctg aagctcgggg
1021 ggctgcaggt cctgaggacc ctggtgcagg agaagggcac ggaggtgctc gccgtgcgcg
1081 tggtcacact gctctacgac ctggtcacgg agaagatgtt cgccgaggag gaggctgagc
1141 tgacccagga gatgtcccca gagaagctgc agcagtatcg ccaggtacac ctcctgccag
1201 gcctgtggga acagggctgg tgcgagatca cggcccacct cctggcgctg cccgagcatg
1261 atgcccgtga gaaggtgctg cagacactgg gcgtcctcct gaccacctgc cgggaccgct
1321 accgtcagga cccccagctc ggcaggacac tggccagcct gcaggctgag taccaggtgc
1381 tggccagcct ggagctgcag gatggtgagg acgagggcta cttccaggag ctgctgggct
1441 ctgtcaacag cttgctgaag gagctgagat gaggccccac accaggactg gactgggatg
1501 ccgctagtga ggctgagggg tgccagcgtg ggtgggcttc tcaggcagga ggacatcttg
1561 gcagtgctgg cttggccatt aaatggaaac ctgaaggcca aaaaaaaaaa aaaaaaaaaa
1621 aaa
//