LOCUS BC011557 1870 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens microtubule-associated protein, RP/EB family, member
3, mRNA (cDNA clone MGC:20025 IMAGE:4561018), complete cds.
ACCESSION BC011557
VERSION BC011557.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1870)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1870)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: e Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10800411.
FEATURES Location/Qualifiers
source 1..1870
/db_xref="H-InvDB:HIT000035287"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20025 IMAGE:4561018"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1870
/gene="MAPRE3"
/gene_synonym="EB3"
/gene_synonym="EBF3"
/gene_synonym="EBF3-S"
/gene_synonym="RP3"
/db_xref="GeneID:22924"
/db_xref="HGNC:HGNC:6892"
/db_xref="MIM:605788"
CDS 139..984
/gene="MAPRE3"
/gene_synonym="EB3"
/gene_synonym="EBF3"
/gene_synonym="EBF3-S"
/gene_synonym="RP3"
/codon_start=1
/product="microtubule-associated protein, RP/EB family,
member 3"
/protein_id="AAH11557.1"
/db_xref="GeneID:22924"
/db_xref="HGNC:HGNC:6892"
/db_xref="MIM:605788"
/translation="MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAY
CQFMDMLFPGCVHLRKVKFQAKLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQ
DNFEFIQWFKKFFDANYDGKDYNPLLARQGQDVAPPPNPGDQIFNKSKKLIGTAVPQR
TSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGGHETDAQILELNQQLVDLKLTVDG
LEKERDFYFSKLRDIELICQEHESENSPVISGIIGILYATEEGFAPPEDDEIEEHQQE
DQDEY"
BASE COUNT 441 a 557 c 480 g 392 t
ORIGIN
1 gccggagacc gcggcggcct cagcgaggac cctccgcccc ggagccgccg gccggagccg
61 cagcctctgc cgcagcgccc ccgccacctg tcccctcccc ctccgcctcc gccggagccg
121 cctcgtgcac tctggggtat ggccgtcaat gtgtactcca catctgtgac cagtgaaaat
181 ctgagtcgcc atgatatgct tgcatgggtc aacgactccc tgcacctcaa ctataccaag
241 atagaacagc tttgttcagg ggcagcctac tgccagttca tggacatgct cttccccggc
301 tgtgtgcact tgaggaaagt gaagttccag gccaaactag agcatgaata catccacaac
361 ttcaaggtgc tgcaagcagc tttcaagaag atgggtgttg acaaaatcat tcctgtagag
421 aaattagtga aaggaaaatt ccaagataat tttgagttta ttcagtggtt taagaaattc
481 tttgacgcaa actatgatgg aaaggattac aaccctctgc tggcgcggca gggccaggac
541 gtagcgccac ctcctaaccc aggtgatcag atcttcaaca aatccaagaa actcattggc
601 acagcagttc cacagaggac gtcccccaca ggcccaaaaa acatgcagac ctctggccgg
661 ctgagcaatg tggccccccc ctgcattctc cggaagaatc ctccatcagc ccgaaatggc
721 ggccatgaga ctgatgccca aattcttgaa ctcaaccaac agctggtgga cttgaagctg
781 acagtggatg ggctggagaa ggaacgtgac ttctacttca gcaaacttcg tgacatcgag
841 ctcatctgcc aggagcatga aagtgaaaac agccctgtta tctcaggcat cattggcatc
901 ctctatgcca cagaggaagg attcgcaccc cctgaggacg atgagattga agagcatcaa
961 caagaagacc aggacgagta ctgagggcgg ccgcagccct ggctgactgc acagcttccc
1021 cgtgcctccc tccctgctcc actcccacat tatagtcctt tcctaacacg gtcggccggg
1081 tgctttgtgt cagtgctgca gcactgggga gccaggcgag gggggcttgg gggcatgggg
1141 ccggaaagca ggcagaagcc cgtcctgggt ggtgctggcc cagttggtgg gacccctgtc
1201 cacacccacc ctatttattt ccgttgtctc tctgctgtgt cgcccaacac ttcccagggt
1261 gctgctgcca cccgccccag ccagccacct gctcctgaca gccagcagct gtgtatttga
1321 caaagtcatt ggtatatttt tacttactgg attctccttg cactttacct gttcttttcc
1381 agagctgaca gcacgggctc cggcgcagtg tgcctggctt ggcttccctt ccccatggct
1441 gggggctggg gtaggactca cccattctaa tttattttgt cttttggctt ctcagtagct
1501 aaggggaagg ctgatgtcag gagagggaga gggggctgag gaggtagtgc tgtaggccca
1561 gggggtcagg gaaagggagg ggggcatgtg agggatggaa atgacctcct ggcaccaggc
1621 tcacccaccc aaggccccct gccccagcac tgaatcccag cgctgccctg aggcccccag
1681 ccactccctc cagcagcctg gttcaccaca caaactctgc ctggacccca ttgtctgtct
1741 gcttcccacc tgccctcccc accccctgcc cctcgggcac cagcctgcat atgtgttcac
1801 ttttatttaa ataaacttgt gtggtaaaag taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaac
//