LOCUS BC011550 1737 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RNA methyltransferase like 1, mRNA (cDNA clone
MGC:19968 IMAGE:4620063), complete cds.
ACCESSION BC011550
VERSION BC011550.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1737)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1737)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: i Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359921.
FEATURES Location/Qualifiers
source 1..1737
/db_xref="H-InvDB:HIT000035282"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19968 IMAGE:4620063"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1737
/gene="RNMTL1"
/gene_synonym="FLJ10581"
/gene_synonym="HC90"
/db_xref="GeneID:55178"
/db_xref="HGNC:HGNC:18485"
CDS 13..1275
/gene="RNMTL1"
/gene_synonym="FLJ10581"
/gene_synonym="HC90"
/codon_start=1
/product="RNA methyltransferase like 1"
/protein_id="AAH11550.1"
/db_xref="GeneID:55178"
/db_xref="HGNC:HGNC:18485"
/translation="MAALVRPSRFVVRPLLQVVQAWDLDARRWVRALRRSPVKVVFPS
GEVVEQKRAPGKQPRKAPSEASAQEQREKQPLEESASRAPSTWEESGLRYDKAYPGDR
RLSSVMTIVKSRPFREKQGKILLEGRRLISDALKAGAVPKMFFFSRLEYLKELPVDKL
KGVSLIKVKFEDIKDWSDLVTPQGIMGIFAKPDHVKMTYPKTQLQHSLPLLLICDNLR
DPGNLGTILRSAAGAGCSKVLLTKGCVDAWEPKVLRAGMGAHFRMPIINNLEWETVPN
YLPPDTRVYVADNCGLYAQAEMSNKASDHGWVCDQRVMKFHKYEEEEDVETGASQDWL
PHVEVQSYDSDWTEAPAAVVIGGETYGVSLESLQLAESTGGKRLLIPVVPGVDSLNSA
MAASILLFEGKRQLRGRAEDLSRDRSYH"
BASE COUNT 439 a 410 c 517 g 371 t
ORIGIN
1 gtctcaggga acatggcggc gctggtgaga ccctcgaggt ttgtcgtgcg accgttgctg
61 caggtggtcc aggcttggga ccttgacgcg aggcgctggg tccgggcgct gcggcggagc
121 ccagtgaaag tggtgtttcc ttccggagag gtggtggaac agaagcgcgc tcctgggaag
181 cagccccgca aggcaccatc tgaggccagt gcccaggagc aacgagagaa acaaccgctc
241 gaggagtccg catcccgcgc tcccagcacc tgggaagagt ctgggcttcg ctacgataaa
301 gcttatcccg gggacaggag gctgagcagt gtaatgacaa tagtaaagtc caggccattt
361 cgggaaaaac aagggaagat cctgctggaa ggtcgcaggc tcatttcaga cgctctcaag
421 gctggagctg tgccaaaaat gttcttcttt agccgtctag aatacctaaa ggagttgcca
481 gtcgataagc tgaaaggtgt cagcctcatt aaggtgaaat ttgaggatat caaggattgg
541 tccgacctcg taacgccaca aggaataatg gggatttttg ccaagcctga ccatgttaag
601 atgacatatc caaagactca gcttcagcat tcactgcctt tattattgat ttgtgacaat
661 ctccgtgacc ctgggaacct ggggacaatt ctgagatctg cagctggggc aggctgcagc
721 aaagtgttac tcaccaaagg ctgtgtggat gcctgggagc ccaaagtgct ccgggcgggt
781 atgggcgcac atttccggat gcccattatc aataatctgg aatgggaaac cgtgcccaat
841 tacctgcccc ctgacactcg ggtctatgtg gctgacaact gtggccttta tgcccaggct
901 gagatgtcta ataaagctag tgaccatggc tgggtgtgtg atcaacgagt gatgaagttt
961 cacaagtatg aggaagagga agatgtagaa accggagcca gtcaagattg gctgcctcat
1021 gttgaggttc agagttacga ctcggactgg acagaggcgc cggcagctgt ggtgattggc
1081 ggggagacct acggcgtgag cctggagtcc ctgcagctgg ccgagagcac tggtggcaag
1141 aggctgctga tccccgttgt gcctggtgtg gacagcctca actcggccat ggcggcaagc
1201 atcctgcttt tcgaagggaa aagacagctg cgggggaggg cggaggactt gagcagggac
1261 aggagttacc actgaggacg cagaagtgac ttctgcttga ggacgtctgc agctcctcct
1321 acaccagcac actggtggga ggctggcgga gtcagtgact atggccccca cgttcaggag
1381 gaaggtgtga tgccgtcata cagttacagg aaaaataaga acttcctcag aaagaacagg
1441 tccgaattct tcctgtcgcg tcactgattt tgaggttctt ttttctcttg gtgacaatag
1501 gtgacccacg tggctctgtg tgtttttaaa aattgtccac caagaagcac tttgtgccca
1561 gaaagttcct gaagcatcat cctggcaggg aggcgcctgc tccaccagct ggtgggtgtt
1621 tgtaatcgcc aagcaccagc tataggtcac agccacatca ctcacagctg atcactggtt
1681 ggtggaaaat aaactatgag cagcagataa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//