LOCUS BC011534 3755 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens enhancer of mRNA decapping 3 homolog (S. cerevisiae), mRNA (cDNA clone MGC:9943 IMAGE:3875364), complete cds. ACCESSION BC011534 VERSION BC011534.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3755) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3755) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: p Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923612. FEATURES Location/Qualifiers source 1..3755 /db_xref="H-InvDB:HIT000035272" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9943 IMAGE:3875364" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3755 /gene="EDC3" /gene_synonym="FLJ21128" /db_xref="GeneID:80153" /db_xref="HGNC:HGNC:26114" /db_xref="MIM:609842" CDS 159..1685 /gene="EDC3" /gene_synonym="FLJ21128" /codon_start=1 /product="enhancer of mRNA decapping 3 homolog (S. cerevisiae)" /protein_id="AAH11534.1" /db_xref="GeneID:80153" /db_xref="HGNC:HGNC:26114" /db_xref="MIM:609842" /translation="MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNG VKCLVPEVTFRAGDITELKILEIPGPGDNQHFGDLHQTELGPSGAGCQVGINQNGTGK FVKKPASSSSAPQNIPKRTDVKSQDVAVSPQQQQCSKSYVDRHMESLSQSKSFRRRHN SWSSSSRHPNQATPKKSGLKNGQMKNKDDECFGDDIEEIPDTDFDFEGNLALFDKAAV FEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPIVYRRIIVPHNVSKEFCTDSG LVVPSISYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLLGGPNRLNPKNVHQR PTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSLFSKTQGQQ VSSLKDLPTSPVDLVINCLDCPENVFLRDQPWYKAAVAWANQNRAPVLSIDPPVHEVE QGIDAKWSLALGLPLPLGEHAGRIYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA " BASE COUNT 828 a 1003 c 1013 g 911 t ORIGIN 1 ggcgcttccg gcagcggcgg cggtggtgaa ggccgatgct gtgggggtgg gcgtggagag 61 aattcttctg tgggtcctct ggtgttgagt ggtcggcttg gtgtggtgtg cggaggagct 121 ccaggcccgt cggcgcggag tggtctcacg tgtgaaacat ggctacagat tggctgggaa 181 gtattgtgtc catcaattgt ggagatagct tgggtgtcta tcagggaaga gtgtcagctg 241 tggatcaggt cagccagacc atttctctca cccggccttt ccataatgga gtgaagtgtc 301 ttgttccaga agtcaccttc agggcaggtg acattacgga gttaaaaatt ctggagatac 361 caggacctgg agacaaccaa cattttggag accttcatca aacagaatta ggcccctctg 421 gtgctggctg ccaagtgggc atcaatcaga atggcacagg caagtttgtc aagaagccag 481 cctcttccag cagtgcccct cagaatatcc ctaagaggac agatgtgaag agccaggatg 541 ttgccgtttc cccgcagcag caacagtgct caaagagcta tgtcgacagg cacatggaat 601 ccttgagtca gtccaaaagt ttccgtcgtc ggcacaactc ctggtcatct agtagcaggc 661 acccaaatca ggcaactccc aagaaaagtg gtttaaagaa tggccagatg aagaataaag 721 atgacgagtg cttcggggat gatattgagg agatcccaga cacagatttt gattttgaag 781 ggaacctggc tctttttgac aaggcagctg tgtttgagga gattgatacc tatgaaagga 841 gaagtggtac ccgttcccgg ggcatcccaa atgaaaggcc cactcggtac cgccatgatg 901 agaacatctt ggagtccgag cccattgtct atcgacggat catagtgccc cacaacgtga 961 gcaaggagtt ctgcacggac tctggcctgg ttgtcccaag tatttcctat gagctgcata 1021 aaaagctgtt gtccgtggct gagaagcatg ggctgaccct tgagcggaga ctggagatga 1081 caggtgtgtg tgccagtcag atggcactga ccctcctcgg aggacctaac aggttgaatc 1141 ccaaaaatgt tcaccagagg cctacagtgg ctctactgtg tggacctcat gtgaaggggg 1201 ctcagggtat cagctgtgga aggcacctag ccaaccatga tgtccaggtc atccttttcc 1261 tgcccaattt tgtcaagatg ttggaatcta tcaccaatga gctgtcgctc ttcagcaaga 1321 cccaaggcca acaagtgtct agcctcaaag atctgcccac tagccctgtg gacctggtca 1381 tcaactgcct ggattgccct gagaacgtct tcctgcgcga tcaaccctgg tacaaggcag 1441 ctgtggcctg ggccaaccag aaccgggcac cagtactcag catagaccct cctgtgcatg 1501 aagtcgaaca gggcattgat gccaaatggt cactggcact gggcctgcct ctgccactgg 1561 gggagcacgc aggccgtatc tatttgtgcg acattggcat tccccagcag gtcttccagg 1621 aggtgggcat caactaccac tcgccctttg gctgcaagtt tgttatccca ctgcactctg 1681 cttagagggt tcctgcgcag gcaggactct gctgtcccct gctgctcctg ataacaaacg 1741 ccttaaggat atgaagcttc atggaccttg ttaaagtttt ttctcttttg ggtttgtttc 1801 ttctgtgaga gaacagaact tacttaaaac tgacctgtca cttgctctta gccagggaag 1861 tctttcccac tgggttccgg gctgggtggc aggctgagcg tgcagcaact ccaggcatct 1921 ctaccctcag ccccctgcac ggccaggtgg gcctttgttt acagccgtag gcagctctca 1981 agactgtgtt tcaggtttac agccactggg cctgggcaca cacattgaag agtgggccag 2041 gtcctgtctg ggggcctgta cctgctctat ttcagagctt gtggctttgt gtctcccctg 2101 ctttccccac gcagacagcc cttcctctgt agaaccagct gcacggcagc tgtccaccag 2161 agggcagacc tgcactctcc attcatgtcc agggctgtga cagaccaggc cttcccctag 2221 ccccacaagt tgatttgggg ggttttgacc cttactcctg agctgatcca agttttatgc 2281 tgatttttcc aaggatctct ccctcctttt ccctccatca ctcagaggta gggaaggggg 2341 cggcattagg atggtgttac tgtattggga ttttatgttg ttctgtcgtc ttcagcacag 2401 gtagtataag gttatattac tgtagaacca cagtgcccat cttgccagca gtgcccgccc 2461 ccaccctcaa agctgagcag gttgagcctt tgcctagtct ggggccagac ccctcagatg 2521 gggatatccc tgggggagcc tggtgctgaa ccagaagagg cttcctggtg cttctgtcct 2581 aggccaccac tcctccagcc ctttgcccgc acatacatgc cccacctact ctttcatccc 2641 ctctgccctt cccctgaaac ggtcctttgc agctgtcatc ccagagcagg cagatgggct 2701 cccgtgcttg agctccaccc cagctcttac atcatctggg ctttgaacct tttacatttg 2761 tccagtctag atgagtaggc ttggggccag caccctgtct caaagatggc aaaatgaggc 2821 tagttctgga tgagctagct ggtgtgggtt ccaaccatag gaacacactg atgctcaaat 2881 cctaaggtgc caagctctag gccctggagg ctggtagaac aggatctatg cctggaatcc 2941 tggcagggat tcctgtcaag gacttgtgtt taagcctgct tcagggcttc aggctgcttc 3001 tgctctgtgt ctgcccaggc tggctgagcg ggtggatggg tggacagaag ggctcaccaa 3061 ggattgtgga catagggtag gccctggtac cacgggtttc aggctgttat cacttccctt 3121 gtaggaacat agccagaagc agatgagcca gggtagaggg ctggcccctc ctctcatctt 3181 cccttcagtc ttaaattgtc tccagcgatg ggaagaggcc agggactgta acccttgtgc 3241 tgtgtattct ctgagcctct gctcactctc agggccaagc agctcccaag ccggggccct 3301 ctcttggcca aaatctgagg agcagtctag gttacaggct ttttggtagg taggttctgg 3361 ctgcctgtta atgcagttag gccccctgat taggtacagt gagaaacaag ctagaacaac 3421 cctggcccag aagactgtcc actccagcaa gatccaggga tgatagcctt gcagggccac 3481 tgggagtttg tgcccaagct tctccctctt ctctccccag ggggcactgg gactggtccc 3541 tgccctcatc cttagcctgg gccttcccca gaggtattaa agagaagtat gattcctctg 3601 tcttcagttc ttttcagggg catcctgccc atagtaccca gttcccaagg ggcccccagt 3661 cacgtggtga agcctagcac tcatgcagct cttagggaac caaaaaccag cactgaaata 3721 aagctgaatg actgactgaa aaaaaaaaaa aaaaa //