LOCUS BC011525 2197 bp mRNA linear HTC 24-JAN-2005
DEFINITION Homo sapiens SCY1-like 2 (S. cerevisiae), mRNA (cDNA clone
IMAGE:3873314), with apparent retained intron.
ACCESSION BC011525
VERSION BC011525.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2197)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2197)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47604943
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2197
/db_xref="H-InvDB:HIT000087651"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3873314"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 719 a 407 c 435 g 636 t
ORIGIN
1 aaagccagag tcagtggcca ggcacgaagg cagagcagga acagccagga ggcgtttatt
61 aggggggcgg ggggaaagag ccccagcacc gcccctcctg gaagaaggaa gaggtaacta
121 taactaccca atattgcagc catggagtcc atgcttaata aattgaagag tactgttaca
181 aaagtaacag ctgatgtcac tagtgctgta atgggaaatc ctgtcactag agaatttgat
241 gttggtcgac acattgccag tggtggcaat gggctagctt ggaagatttt taatggcaca
301 aaaaagtcaa caaagcagga agtggcagtt tttgtctttg ataaaaaact gattgacaag
361 tatcaaaaat ttgaaaagga tcaaatcatt gattctctaa aacgaggagt ccaacagtta
421 actcggcttc gacaccctcg acttcttact gtccagcatc ctttagaaga atccagggat
481 tgcttggcat tttgtacaga accagttttt gccagtttag ccaatgttct tggtaactgg
541 gaaaatctac cttcccctat atctccagac attaaggatt ataaacttta tgatgtagaa
601 accaaatatg gtttgcttca ggtttctgaa ggattgtcat tcttgcatag cagtgtgaaa
661 atggtgcatg gaaatatcac tcctgaaaat ataattttga ataaaagtgg agcctggaaa
721 ataatgggtt ttgatttttg tgtatcatca accaatcctt ctgaacaaga gcctaaattt
781 ccttgtaaag aatgggaccc aaatttacct tcattgtgtc ttccaaatcc tgaatatttg
841 gctcctgaat acatactttc tgtgagctgt gaaacagcca gtgatatgta ttctttagga
901 actgttatgt atgctgtatt taataaaggg aaacctatat ttgaagtcaa caagcaagat
961 atttacaaga gtttcagtag gcagttggat cagttgagtc gtttaggatc tagttcactt
1021 acaaatatac ctgaggaagt tcgtgaacat gtaaagctac tgttaaatgt aactccgact
1081 gtaagaccag atgcagatca aatgacaaag attcccttct ttgatgatgt tggtgcagta
1141 acactgcaat attttgatac cttattccaa agagataatc ttcagaaatc acagtttttc
1201 aaaggactgc caaaggttct accaaaactg cccaagcgtg tcattgtgca gagaattttg
1261 ccttgtttga cttcagaatt tgtaaaccct gacatggtac cttttgtttt gcccaatgtt
1321 ctacttattg ctgaggaatg caccaaagaa gaatatgtca aattaattct tcctgaactt
1381 ggccctgtgt ttaagcagca ggagccaatc cagattttgt taattttcct acaaaaaatg
1441 gatttgctac taaccaaaac ccctcctgat gagataaaga acagtgttct acccatggtt
1501 tacagagcac tagaagctcc ttccattcag atccaggagc tctgtctaaa catcattcca
1561 acctttgcaa atcttataga ctacccatcc atgaaaaacg ctttgatacc aagaattaaa
1621 aatgcttgtc tacaaacatc ttcccttgcg gttcgtgtaa attcattagt gtgcttagga
1681 aagattttgg aatacttgga taagtggttt gtacttgatg atatcctacc cttcttacaa
1741 caaattccat ccaaggaacc tgcggtcctc atgggaattt taggtattta caaatgtact
1801 tttactcata agaagttggg aatcaccaaa gagcagctgg ccggaaaagt gttgcctcat
1861 cttattcccc tgagtattga aaacaatctt aatcttaatc agttcaattc tttcatttcc
1921 gtcataaaag aaatgcttaa tagattggag tctgaacata agactaaact ggagcaactt
1981 catataatgc aagaacagca gaaatctttg gatataggaa atcaaatgaa tgtttctgag
2041 gagatgaaag ttacaaatat tgggaatcag caaattgaca aagtttttaa caacattgga
2101 gcagaccttt tgactggcag tgagtccgaa aataaagagg acgggttaca gaataaacat
2161 aaaagagcat cacttacact tgaaaaaaaa aaaaaaa
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