LOCUS BC011522 3010 bp mRNA linear HUM 26-APR-2019
DEFINITION Homo sapiens CD164 molecule, sialomucin, mRNA (cDNA clone MGC:9546
IMAGE:3854912), complete cds.
ACCESSION BC011522
VERSION BC011522.3
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3010)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3010)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 3010)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-APR-2019) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Apr 26, 2019 this sequence version replaced BC011522.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222157.
FEATURES Location/Qualifiers
source 1..3010
/db_xref="H-InvDB:HIT000035267"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9546 IMAGE:3854912"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3010
/gene="CD164"
/gene_synonym="endolyn"
/gene_synonym="MGC-24"
/gene_synonym="MUC-24"
/db_xref="GeneID:8763"
/db_xref="HGNC:HGNC:1632"
/db_xref="MIM:603356"
CDS 66..659
/gene="CD164"
/gene_synonym="endolyn"
/gene_synonym="MGC-24"
/gene_synonym="MUC-24"
/codon_start=1
/product="CD164 molecule, sialomucin"
/protein_id="AAH11522.1"
/db_xref="GeneID:8763"
/db_xref="HGNC:HGNC:1632"
/db_xref="MIM:603356"
/translation="MSRLSRSLLWAATCLGVLCVLSADKNTTQHPNVTTLAPISNVTS
APVTSLPLVTTPAPETCEGRNSCVSCFNVSVVNTTCFWIECKDESYCSHNSTVSDCQV
GNTTDFCSVSTATPVPTANSTAKPTVQPSPSTTSKTVTTSGTTNNTVTPTSQPVRKST
FDAASFIGGIVLVLGVQAVIFFLYKFCKSKERNYHTL"
BASE COUNT 892 a 545 c 541 g 1032 t
ORIGIN
1 gattgagggg ttgactgagc gttgcgagcc ttagctttct cccgaacgcc agcgctgagg
61 acacgatgtc gcggctctcc cgctcactgc tttgggccgc cacctgcctg ggcgtgctct
121 gcgtgctgtc cgcggacaag aacacgaccc agcacccgaa cgtgacgact ttagcgccca
181 tctccaacgt aacctcggcg ccggtgacgt ccctcccgct ggtcaccact ccggcaccag
241 aaacctgtga aggtcgaaac agctgcgttt cctgttttaa tgttagcgtt gttaatacta
301 cctgcttttg gatagaatgt aaagatgaga gctattgttc acataactca acagttagtg
361 attgtcaagt ggggaacacg acagacttct gttccgtttc cacggccact ccagtgccaa
421 cagccaattc tacagctaaa cccacagttc agccctcccc ttctacaact tccaagacag
481 ttactacatc aggtacaaca aataacactg tgactccaac ctcacaacct gtgcgaaagt
541 ctacctttga tgcagccagt ttcattggag gaattgtcct ggtcttgggt gtgcaggctg
601 taattttctt tctttataaa ttctgcaaat ctaaagaacg aaattaccac actctgtaaa
661 cagacccatt gaattaataa ggactggtga ttcatttgtg taactcactg aagccaaaat
721 actatctttt aagatgtccc acatggaaga cgctattcca ggatctttaa atttccatgg
781 atgcatatag gatgtttggg agcatcatcc gtgaagaaaa aatcaattaa atcattgtgt
841 tcaacaggaa tatttaaaat attctgcatg aatcctgtgg ctgtcttatt ttaaatagct
901 gctgctgtgg gattatattt tttttcctta acatgccaaa tataactttc tgaaagtgat
961 ggaaaatgtt gtcttgtgca gacaacatca tggctcttgg cagtttaaat ttagtaattt
1021 taatttagtg aacagaattg agaagaacgt gccaaatgag aatcaattag gtggattttt
1081 ggctgtcatt tcaaaagtgg aataaattta ttaatttagt agtactaaat ggtatcctta
1141 gattaaaatt ttgtgcttga taacagctgt tttttctaca ttagaaataa gatgccacac
1201 aaggaactac attccagatt taaagaaatg aaaggatacc attagtgtgt ataacagatt
1261 attgttcata cttgtaaagc atcttatgtc attgagaata taaagaacag tgccttagaa
1321 gacagtgaaa ggtaagctct agcttaatgt ctatgatttg ttctttgaca ttaaggaagg
1381 taaggattgg tcagaggatg taacttgatg tgagcagtag taaacctgtt ttagatatca
1441 tactgttaat attttattga aaatttattt cagagcggag aaacttaagc taaagtctgt
1501 tatacagaat tgaaagcctt cgtatcttga acctcccaac atttttctta tggctgttga
1561 aaagtataga gctaaattga tttaattaca ctttcctttg tactttaaaa aaaagtatgc
1621 tagcactatt gtaccttgaa aggatttcca ccagactgtc ttgagtagtg acttctttgg
1681 tgaggcaaga aggatataca ttattttaga atcatttact atttaaatga gacaatcata
1741 ttattttaga atcatttatt ttaaatgaga caatcatttt aagttttaag ataacagaag
1801 tgaccaatgt aatttcacaa cacctaagga ttttttggtt gatcaggtta ctgtagattt
1861 ttactgattg tcctggatga atagactgtg ctttttcttt ttctctccct tccttcttgg
1921 tttcccatag tataataagc atgcatactt taacttctat agttttctcc tttagagggt
1981 cgtcttcagt tttagaggtt tacttctccc ttgcctttga ctcattggac tagtgcagag
2041 gctttaagta gtttaaaatg ggcttttgct tttctaggtc attaacgttt tttatttagt
2101 ttctttagcc aatagtggct gagtttcgca cttgattttc aatattttat agtaagaaat
2161 gacaaactgc tttgtttcat ttcataaaca aactctgcat ttagataact attaaaggtt
2221 gttaagatga agatttactg tttctttgtt actcgttggt acagctgttt gttttacttg
2281 cacatttgta catatactta atgttttcaa gtgccttaat tgtttaaaat ctctggcttc
2341 aaagtttctt ggggaaaggt cggtttacct cacatttttt gtttccatta gtaatattct
2401 aggtacctca caaaatgtat tatggtgcca tggctgttag tttttagtga gtgctgtagg
2461 attaattcga aaataggcag aattccattc ctcccaaggt ggcaaaaatt agctatactg
2521 atgtaattgt catttacctg ggtatgaatt ccctgacaca cattcatgtc aacatatgta
2581 gcaaattttg tgaaaacata acaatttgaa gcttctgtaa ttttgagcac tgctctaaca
2641 acaagcataa tataaaatta gttagatttt gcaagtctac aaatgagctc ttgcaacaga
2701 actcacagcc tttttacttt tttcccctaa ctttagcaat gtagtatctt gagccattaa
2761 tttttgggtt tttttaaaat ccagaaggta tatagaaacc ttttcagatt tttcatctga
2821 tttgttcttg cagatgttct tctatcaaat accttatttt accttacaga tatttgttgc
2881 acaggcagat actgctgtat ttagacattt ctatttcagt tcattaaaaa ctgcaaaacc
2941 aatctgtatc atgtaccaaa ctgacttaaa ataaatctac atgtttattg aaaaaaaaaa
3001 aaaaaaaaaa
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