LOCUS BC011520 1352 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens stathmin-like 4, mRNA (cDNA clone MGC:18239
IMAGE:4157389), complete cds.
ACCESSION BC011520
VERSION BC011520.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1352)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1352)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361946.
FEATURES Location/Qualifiers
source 1..1352
/db_xref="H-InvDB:HIT000035266"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:18239 IMAGE:4157389"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1352
/gene="STMN4"
/gene_synonym="RB3"
/db_xref="GeneID:81551"
/db_xref="HGNC:HGNC:16078"
CDS 115..765
/gene="STMN4"
/gene_synonym="RB3"
/codon_start=1
/product="stathmin-like 4"
/protein_id="AAH11520.1"
/db_xref="GeneID:81551"
/db_xref="HGNC:HGNC:16078"
/translation="MTLAAYKEKMKELPLVSLFCSCFLADPLNKSSYKYEGWCGRQCR
RKDESQRKDSADWRERRAQADTVDLNWCVISDMEVIELNKCTSGQSFEVILKPPSFDG
VPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEE
NNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKEEASR"
BASE COUNT 397 a 313 c 403 g 239 t
ORIGIN
1 gaggaagaga gcagctcgct tctaactgga ctgcacgttg gtgacagcgt cccaagctgg
61 tgacagaccc actctgtaac tttcagctag attcagccac cagatcccag aaacatgacc
121 cttgctgcct acaaagagaa gatgaaggag ctcccgctgg tgtccttgtt ctgctcctgc
181 ttcctggccg atcccctgaa taagtcgtcc tacaaatatg aaggctggtg tgggagacag
241 tgtaggagga aggatgaaag ccagcggaaa gacagtgctg actggagaga aagaagagct
301 caggcagaca cggtggacct gaattggtgc gtcatttccg acatggaagt catcgagctg
361 aacaaatgca cctcgggcca atcctttgaa gtcatcctga agccaccctc ctttgatggg
421 gttcccgagt tcaacgcctc cctgccaagg cggcgagacc catccctgga agagatccag
481 aagaaactag aagcggctga ggagcgaagg aagtaccagg aagcggagct cctgaaacac
541 ctagcagaga aacgggaaca tgagagagag gtgatccaaa aggccattga ggaaaacaac
601 aacttcatca agatggctaa ggaaaaactg gcccagaaga tggaatccaa caaggagaac
661 agggaggccc acctcgccgc catgttggaa cggctgcaag agaaggacaa gcacgccgag
721 gaggtgcgga aaaacaagga gctgaaggaa gaggcctcca ggtaaagcct agaggccaaa
781 gaactttcca ggtcagccgg acagctccag cagctccacg ttccaggcag cctcgcccgc
841 cggctgcgct cccagcactg gggtttgggg ggaggggggt ggccaagggg cgtttcctct
901 gcttttggtg tttgtacatg ttaagaattg accagtgaag ccatcctatt tgtttccggg
961 gaacaatgac ggggtgggag aggggagagg agagagtttg ggaaagggag atggagaaga
1021 actcaaggac attgcaaccc tgcccggcgc agatctgatt ttcacatctc tacctggaca
1081 ttgagcctcc aggcaccatg ttgaggagag atgaaaacca gggcggtaga acttcagggt
1141 gaaggacaga gtcctgggtg gggcagcggc tgcagggcgc accagagaac ccagccagag
1201 gggttgtgag taccagtggt gttgcttcca ccctgcagca ggtgggatga ggtctgtgtg
1261 tgtgtgtgaa ccatcatttt ttgatcatca tgaccaatga aacattgact ccaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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