LOCUS BC011446 1544 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens DEP domain containing 7, mRNA (cDNA clone
IMAGE:4073766), with apparent retained intron.
ACCESSION BC011446
VERSION BC011446.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1544)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1544)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: c Column: 23
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1544
/db_xref="H-InvDB:HIT000087638"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4073766"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
BASE COUNT 519 a 300 c 331 g 394 t
ORIGIN
1 ggggagggag ctgtgaagct gctggaggag ttggcgtccg gggagcaagg gccatggcca
61 ccgtgcagga gaaggctgct gcgctgaacc tctcggctct ccacagcccc gcgcacaggc
121 ctccgggttt cagtgtagct cagaagccat ttggagccac gtatgtatgg agcagcatca
181 taaacactct tcaaacacaa gtggaagtga aaaaacgaag gcaccgttta aaacgacata
241 atgactgctt tgttggttca gaagctgtgg atgtcatttt ttctcaccta attcagaata
301 agtattttgg tgatgtagat attcctcgag ccaaagtggt gagagtgtgt caagcgctta
361 tggactacaa agtatttgaa gcagttccaa ccaaagtctt tggaaaagac aaaaaaccta
421 catttgaaga tagtagttgc agcctttata gattcaccac aatacctaac caagacagtc
481 agttaggcaa agagaacaaa ctatattcac ctgccaggta tgcagatgca ttatttaagt
541 catccgatat cagatcagcc agtttagagg acctgtggga aaatctgagt ttaaagcctg
601 ccaactcccc tcatgtaaat atctctgcaa ccttgtctcc acaagttatt aatgaagtgt
661 ggcaagaaga aacaattggg cgtctactac aacttgtaga ccttccactt cttgactcct
721 tactgaaaca gcaagaggct gtacctaaaa ttcctcaacc taagaggcag tccaccatgg
781 tcaacagcag taactatctg gatcgaggga ttctcaaggc ttatagtgac tctcaggaag
841 atgagtggct ctcggcagca attgactgtt tagaatacct tccagaccaa atggtggtgg
901 aaataagcag aagctttcct gagcaaccag accgaacaga cttagtgaaa gaacttctgt
961 ttgatgccat tggcagatat tacagtagta gggaacctct gttaaatcac ttatctgatg
1021 ttcataatgg aattgcagaa ctcttagtga atgggaagac ggaaatagct ttagaagcta
1081 cccagctcct tctaaagctt ttagatttcc aaaatagaga agaatttaga agactactgt
1141 atttcatggc tgttgcagca aatccttctg agtttaaatt acagaaagaa agtgacaacc
1201 gaatggttgt gaaaaggata ttctcaaaag ctattgttga caataaaaat ttatccaaag
1261 gcaaaacaga tcttctggta ctctttttaa tggatcatca gaaagatgtt tttaagattc
1321 ctggaactct acataaaatt gtaagtgtta agcttatggc catacagaac ggaagagatc
1381 caaatagaga tgcaggatat atttattgcc agagaattga tcaacgtgac tattccaaca
1441 atacagagaa gacaaccaaa gatgagctgt tgaatttact aaaaactctt gatgaggatt
1501 caaaactttc tgccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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