LOCUS BC011408 2255 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens non-SMC condensin II complex, subunit D3, mRNA (cDNA
clone IMAGE:3870709), partial cds.
ACCESSION BC011408
VERSION BC011408.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2255)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2255)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 13 Row: j Column: 2.
FEATURES Location/Qualifiers
source 1..2255
/db_xref="H-InvDB:HIT000035247"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3870709"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2255
/gene="NCAPD3"
/gene_synonym="CAP-D3"
/gene_synonym="hCAP-D3"
/gene_synonym="hcp-6"
/gene_synonym="hHCP-6"
/db_xref="GeneID:23310"
/db_xref="HGNC:HGNC:28952"
/db_xref="MIM:609276"
CDS <1..1678
/gene="NCAPD3"
/gene_synonym="CAP-D3"
/gene_synonym="hCAP-D3"
/gene_synonym="hcp-6"
/gene_synonym="hHCP-6"
/codon_start=2
/product="NCAPD3 protein"
/protein_id="AAH11408.2"
/db_xref="GeneID:23310"
/db_xref="HGNC:HGNC:28952"
/db_xref="MIM:609276"
/translation="SIPALVRELEVCEDVAVRNNVIIVMCDLCIRYTIMVDKYIPNIS
MCLKDSDPFIRKQTLILLTNLLQEEFVKWKGSLFFRFVSTLIDSHPDIASFGEFCLAH
LLLKRNPVMFFQHFIECIFHFNNYEKHEKYNKFPQSEREKRLFSLKGKSNKERRMKIY
KFLLEHFTDEQRFNITSKICLSILACFADGILPLDLDASELLSDTFEVLSSKEIKLLA
MRSKPDKDLLMEEDDMALANVVMQEAQKKLISQVQKRNFIENIIPIIISLKTVLEKNK
IPALRELMHYLREVMQDYRDELKDFFAVDKQLASELEYDMKKYQEQLVQEQELAKHAD
VAGTAGGAEVAPVAQVALCLETVPVPAGQENPAMSPAVSQPCTPRASAGHVAVSSPTP
ETGPLQRLLPKARPMSLSTIAILNSVKKAVESKSRHRSRSLGVLPFTLNSGSPEKTCS
QVSSYSLEQESNGEIEHVTKRAISTPEKSISDVTFGAGVSYIGTPRTPSSAKEKIEGR
SQGNDILCLSLPDKPPPQPQQWNVRSPARNKDTPACSRRSLRKTPLKTAN"
BASE COUNT 689 a 519 c 505 g 542 t
ORIGIN
1 gagcatccca gccctggtgc gagagctcga ggtgtgtgag gacgtggctg tccgcaacaa
61 cgtcatcatt gtaatgtgcg atctctgcat tcgctacacc atcatggtgg acaagtatat
121 tcccaacatc tccatgtgtc tgaaggattc cgacccattc atccggaagc agacactcat
181 cttgcttacc aatctcttgc aggaggaatt tgtgaaatgg aagggctccc tgttcttccg
241 atttgtcagc actctgatcg attcacaccc agacattgcc agcttcgggg agttttgcct
301 ggctcacctg ttactgaaga ggaaccctgt catgttcttc caacacttca ttgaatgtat
361 ttttcacttt aataactatg agaagcatga gaagtacaac aagttccccc agtcagagag
421 agagaagcgg ctgttttcat tgaagggaaa gtcaaacaaa gagagacgaa tgaaaatcta
481 caaatttctt ctagagcact tcacagatga acagcgattc aacatcactt ccaaaatctg
541 ccttagtatt ttggcgtgct ttgctgatgg catcctaccc ctggacctgg acgccagtga
601 gttactctca gacacgtttg aggtcctcag ctcaaaggag atcaagcttt tggcaatgag
661 atctaaacca gacaaagacc tccttatgga agaagatgac atggccttgg caaatgtagt
721 catgcaggaa gctcagaaga agctcatctc acaagttcag aagaggaatt tcatagaaaa
781 tattattcca attatcatct ccctgaagac tgtgctggag aaaaataaga tcccagcttt
841 gcgggaactc atgcactatc tcagggaggt gatgcaggat taccgagatg agctcaagga
901 cttctttgca gttgacaaac agctggcatc agagcttgag tatgacatga agaagtacca
961 ggaacagctg gtccaggagc aggagctagc aaaacatgca gatgtggccg ggacggctgg
1021 aggtgctgag gtggcacctg tggcacaggt tgccctgtgt ttagaaacag tgccagttcc
1081 tgctggccaa gaaaaccctg ccatgtcacc tgccgtgagc cagccctgca cacccagggc
1141 aagtgctggc catgtagcag tatcatctcc tacacctgaa acagggccat tgcagaggtt
1201 gctgcccaaa gccaggccca tgtccctgag caccattgca atcctgaatt ctgtcaagaa
1261 agccgtggag tcaaagagca ggcatcggag tcggagctta ggagtgctgc ctttcacttt
1321 aaattctgga agcccagaaa aaacgtgcag tcaggtgtct tcatacagtt tggagcaaga
1381 gtcgaatggc gagattgagc acgtgaccaa gcgggccatc agcacccccg agaagagcat
1441 cagtgatgtc acgtttggag caggggtcag ttacatcggg acaccacgga ctccgtcgtc
1501 agccaaagag aaaattgaag gccggagtca aggaaatgac atcttatgtt tatcactgcc
1561 tgataaaccg cccccacagc ctcagcagtg gaatgtgcgg tctcccgcca ggaataaaga
1621 cactccagcc tgcagcagga ggtccctccg aaagacccct ctgaaaacag ccaactaaac
1681 agcgcctccc accagtgtcc aggcaggcag gagcccttga ggaagcagtc tcgtgtcctc
1741 cgtgtgaagg cagctggatc acttcccgca gtccttgggc agcgctttgc tgtggaacac
1801 gagagctcct cctcaggggc ctggcactca ccttctattc tgtatgatgt atttggttaa
1861 acactgtcaa ataatagaga tgtgccagat ttagattttc ttaccctaat ctgtttaata
1921 ttgtaacttt attccatttg aaagtgtcaa gcccattcag ataagctata atctggtctt
1981 taggaacaca actttaaaac tgcagctttc ttttatataa atcaagcctc tgttaacttg
2041 aattccttat agtacatatt ttcccatctg taatgacgaa attttgattc taatattttt
2101 tctattattt ataagtgcaa attttttaaa aaagtgtaca gctttctaaa agtaataaag
2161 gtttagcata aatacaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//