LOCUS BC011396 2327 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens pseudouridylate synthase 7 homolog (S. cerevisiae), mRNA (cDNA clone MGC:17720 IMAGE:3870711), complete cds. ACCESSION BC011396 VERSION BC011396.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2327) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2327) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: j Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50727001. FEATURES Location/Qualifiers source 1..2327 /db_xref="H-InvDB:HIT000035239" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17720 IMAGE:3870711" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2327 /gene="PUS7" /db_xref="GeneID:54517" /db_xref="HGNC:HGNC:26033" CDS 196..2181 /gene="PUS7" /codon_start=1 /product="pseudouridylate synthase 7 homolog (S. cerevisiae)" /protein_id="AAH11396.2" /db_xref="GeneID:54517" /db_xref="HGNC:HGNC:26033" /translation="MEMTEMTGVSLKRGALVVEDNDSGVPVEETKKQKLSECSLTKGQ DGLQNDFLSISEDVPRPPDTVSTGKGGKNSEAQLEDEEEEEEDGLSEECEEEESESFA DMMKHGLTEADVGITKFVSSHQGFSGILKERYSDFVVHEIGKDGRISHLNDLSIPVDE EDPSEDIFTVLTAEEKQRLEELQLFKNKETSVAIEVIEDTKEKRTIIHQAIKSLFPGL ETKTEDREGKKYIVAYHAAGKKALANPRKHSWPKSRGSYCHFVLYKENKDTMDAINVL SKYLRVKPNIFSYMGTKDKRAITVQEIAVLKITAQRLAHLNKCLMNFKLGNFSYQKNP LKLGELQGNHFTVVLRNITGTDDQVQQAMNSLKEIGFINYYGMQRFGTTAVPTYQVGR AILQNSWTEVMDLILKPRSGAEKGYLVKCREEWAKTKDPTAALRKLPVKRCVEGQLLR GLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNNMVSKRIEDYGLKPVPGDLVLKG ATATYIEEDDVNNYSIHDVVMPLPGFDVIYPKHKIQEAYREMLTADNLDIDNMRHKIR DYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFASEGKYRALK MDFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLR" BASE COUNT 746 a 488 c 534 g 559 t ORIGIN 1 cggctggagc gcatctggtc ctccgcgcgg aaagcgctgc ttttgcctgg ccgccctagc 61 cgctggctca tccaagtggc cttcgccgct ctcttgcgtc ccaaccagag cgctggccac 121 ctcgccgccc agctcacgcc gcgcccgcgc tcccaggctc cgggttttct taaatgtttt 181 cttggagcct taaagatgga gatgacagaa atgactggtg tgtcgctgaa acgtggggca 241 ctggttgtcg aagataatga cagtggagtc ccagttgaag agacaaaaaa acagaagctg 301 tcggaatgca gcctaaccaa aggtcaagat gggctacaga atgactttct gtccatcagt 361 gaagacgtgc ctcggcctcc tgacactgtc agtactggga aaggtggaaa gaattctgag 421 gctcagttgg aagatgagga agaagaggag gaagatggac tttcagagga gtgcgaggag 481 gaggaatcag agagttttgc agacatgatg aagcatggac tcactgaggc tgacgtaggc 541 atcaccaagt ttgtgagttc tcatcaaggg ttctcgggaa tcttaaaaga aagatactcc 601 gacttcgttg ttcatgaaat aggaaaagat ggacggatca gccatttgaa tgacttgtcc 661 attccagtgg atgaggagga cccttcagaa gacatattta cagttttgac agctgaagaa 721 aagcagcgat tggaagagct ccagctgttc aaaaataagg aaaccagtgt tgccattgag 781 gttatcgagg acaccaaaga gaaaagaacc atcatccatc aggctatcaa atctctgttt 841 ccaggattag agacaaaaac agaggatagg gaggggaaga aatacattgt agcctaccac 901 gcagctggga aaaaggcttt ggcaaatcca agaaaacatt cttggccaaa atctagggga 961 agttactgcc acttcgtact atataaggaa aacaaagaca ccatggatgc tattaatgta 1021 ctctccaaat acttaagagt caagccaaat atattctcct acatgggaac caaagataaa 1081 agggctataa cagttcaaga aattgctgtt ctcaaaataa ctgcacaaag acttgcccac 1141 ctgaataagt gcttgatgaa ctttaagcta gggaatttca gctatcaaaa aaacccactg 1201 aaattgggag agcttcaagg aaaccacttc actgttgttc tcagaaatat aacaggaact 1261 gatgaccaag tacagcaagc tatgaactct ctcaaggaga ttggatttat taactactat 1321 ggaatgcaaa gatttggaac cacagctgtc cctacgtatc aggttggaag agctatacta 1381 caaaattcct ggacagaagt catggattta atattgaaac cccgctctgg agctgaaaag 1441 ggctacttgg ttaaatgcag agaagaatgg gcaaagacca aagacccaac tgctgccctc 1501 agaaaactac ctgtcaaaag gtgtgtggaa gggcagctgc ttcgaggact ttcaaaatat 1561 ggaatgaaga atatagtctc tgcatttggc ataataccca gaaataatcg cttaatgtat 1621 attcatagct accaaagcta tgtgtggaat aacatggtaa gcaagaggat agaagactat 1681 ggactaaaac ctgttccagg ggacctcgtt ctcaaaggag ccacagccac ctatattgag 1741 gaagatgatg ttaataatta ctctatccat gatgtggtaa tgcccttgcc tggtttcgat 1801 gttatctacc caaagcataa aattcaagaa gcctacaggg aaatgctcac agctgacaat 1861 cttgatattg acaacatgag acacaaaatt cgagattatt ccttgtcagg ggcctaccga 1921 aagatcatta ttcgtcctca gaatgttagc tgggaagtcg ttgcatatga tgatcccaaa 1981 attccacttt tcaacacaga tgtggacaac ctagaaggga agacaccacc agtttttgct 2041 tctgaaggca aatacagggc tctgaaaatg gatttttctc tacccccttc tacttacgcc 2101 accatggcca ttcgagaagt gctaaaaatg gataccagta tcaagaacca gacgcagctg 2161 aatacaacct ggcttcgctg agcagtacct tgtccacaga ttagaaaacg tacacaagtg 2221 tttgcttcct ggctccctgt gcatttttgt cttagttcag actcatatat ggatttcaaa 2281 tctttgtaat aaaaattatt tgtattttta agaaaaaaaa aaaaaaa //