LOCUS BC011265 1874 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens poly-U binding splicing factor 60KDa, mRNA (cDNA clone
MGC:18191 IMAGE:4155549), complete cds.
ACCESSION BC011265
VERSION BC011265.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1874)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1874)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 12 Row: c Column: 9.
FEATURES Location/Qualifiers
source 1..1874
/db_xref="H-InvDB:HIT000035206"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:18191 IMAGE:4155549"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1874
/gene="PUF60"
/gene_synonym="FIR"
/gene_synonym="RoBPI"
/gene_synonym="SIAHBP1"
/db_xref="GeneID:22827"
/db_xref="HGNC:HGNC:17042"
/db_xref="MIM:604819"
CDS 149..1699
/gene="PUF60"
/gene_synonym="FIR"
/gene_synonym="RoBPI"
/gene_synonym="SIAHBP1"
/codon_start=1
/product="PUF60 protein"
/protein_id="AAH11265.1"
/db_xref="GeneID:22827"
/db_xref="HGNC:HGNC:17042"
/db_xref="MIM:604819"
/translation="MENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQT
IAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQRQRALAIMCRVYVGSIYYELGEDTI
RQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQMNSVMLGGRNIKVG
RPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDP
TTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPATPGGLP
PAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAP
GVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKEEEELFPESERPEMLS
EQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAV
NRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGRKVVAEVYDQER
FDNSDLSA"
BASE COUNT 425 a 545 c 574 g 330 t
ORIGIN
1 cccttgcggg cgagcctggc ggggttgcgt tcctgtccgc tagcaggtca atggccagca
61 aggagggggg tccgagccgg cggcggcggc ggcagtggtg gcagcgggag acaaatggaa
121 acctccacag ggcacagact ccatcaagat ggagaacggg cagagcacag ccgccaagct
181 ggggctgcct cccctgacgc ccgagcagca ggaggccctt cagaaggcca agaagtacgc
241 catggagcag agcatcaaga gtgtgctggt gaagcagacc atcgcgcacc agcagcagca
301 gctcaccaac ctgcagatgg cagcagtgac aatgggcttt ggagatcctc tctcaccttt
361 gcaatcgatg gcggctcagc ggcagcgggc gctggccatc atgtgccgcg tctacgtggg
421 ctctatctac tatgagctgg gggaggacac catccgccag gcctttgccc cctttggccc
481 catcaagagc atcgacatgt cctgggactc cgtcaccatg aagcacaagg gctttgcctt
541 cgtggagtat gaggtccccg aagctgcaca gctggccttg gagcagatga actcggtgat
601 gctggggggc aggaacatca aggtgggcag acccagcaac atagggcagg cccagcccat
661 catagaccag ttggctgagg aggcacgggc cttcaaccgc atctacgtgg cctctgtgca
721 ccaggacctc tcagacgatg acatcaagag cgtgtttgag gcctttggca agatcaagtc
781 ctgcacactg gcccgggacc ccacaactgg caagcacaag ggctacggct tcattgagta
841 cgagaaggcc cagtcgtccc aagatgctgt gtcttccatg aacctctttg acctgggtgg
901 ccagtacttg cgggtgggca aggctgtcac accgcccatg cccctactca caccagccac
961 gcctggaggc ctcccacctg ccgctgctgt ggcagctgct gcagccactg ccaagatcac
1021 agctcaggaa gcagtggccg gagcagcggt gctgggtacc ctgggcacac ctggactggt
1081 gtccccagca ctgaccctgg cccagcccct gggcactttg ccccaggctg tcatggctgc
1141 ccaggcacct ggagtcatca caggtgtgac cccagcccgt cctcctatcc cggtcaccat
1201 cccctcggtg ggagtggtga accccatcct ggccagccct ccaacgctgg gtctcctgga
1261 gcccaagaag gagaaggaag aagaggagct gtttcccgag tcagagcggc cagagatgct
1321 gagcgagcag gagcacatga gcatctcggg cagtagcgcc cgacacatgg tgatgcagaa
1381 gctgctccgc aagcaggagt ctacagtgat ggttctgcgc aacatggtgg accccaagga
1441 catcgatgat gacctggaag gggaggtgac agaggagtgt ggcaagttcg gggccgtgaa
1501 ccgcgtcatc atctaccaag agaaacaagg cgaggaggag gatgcagaaa tcattgtcaa
1561 gatctttgtg gagttttcca tagcctctga gactcataag gccatccagg ccctcaatgg
1621 ccgctggttt gctggccgca aggtggtggc tgaagtgtac gaccaggagc gttttgataa
1681 cagtgacctc tctgcgtgac agtggtccct ctccccggac ttgcacttgt tccttgtttc
1741 ctctgggttt tatagtgata cagtggtgtc cccggggcca ggcgcgctct gcccagccca
1801 gcctacagtg cggataaagg tgcggatgct gctggcaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaa
//