LOCUS       BC011234                2033 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens survival motor neuron domain containing 1, mRNA (cDNA
            clone MGC:17138 IMAGE:4153336), complete cds.
ACCESSION   BC011234
VERSION     BC011234.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2033)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2033)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-JUL-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 19 Row: l Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 21361283.
FEATURES             Location/Qualifiers
     source          1..2033
                     /db_xref="H-InvDB:HIT000035196"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:17138 IMAGE:4153336"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2033
                     /gene="SMNDC1"
                     /gene_synonym="SMNR"
                     /gene_synonym="SPF30"
                     /db_xref="GeneID:10285"
                     /db_xref="HGNC:HGNC:16900"
                     /db_xref="MIM:603519"
     CDS             193..909
                     /gene="SMNDC1"
                     /gene_synonym="SMNR"
                     /gene_synonym="SPF30"
                     /codon_start=1
                     /product="survival motor neuron domain containing 1"
                     /protein_id="AAH11234.1"
                     /db_xref="GeneID:10285"
                     /db_xref="HGNC:HGNC:16900"
                     /db_xref="MIM:603519"
                     /translation="MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIE
                     LTKDLLSTQPSETLASSDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENG
                     TAAITFAGYGNAEVTPLLNLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKK
                     AQRIKELEQEREDQKVKWQQFNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIAD
                     KPMTQYQDTSKYNVRHLMPQ"
BASE COUNT          616 a          374 c          397 g          646 t
ORIGIN      
        1 cctccttcca gtgcccggcg ttcctccctt ccccctcgcc gccgaccgag ttcttccttt
       61 tcagaccggg tcgccttgct gtcgtcgcgg tgattttcct gctactgcta ctgctgctgc
      121 tgccaccgcc actaccactg ggctcatttg ccccgacccc ttcccgccgc cccgccccca
      181 gccccacaca agatgtcaga ggatttagca aagcagctgg caagctacaa agctcagctc
      241 cagcaagttg aagctgcatt atctggaaat ggagaaaatg aagatttgct aaaattgaag
      301 aaagatttac aagaagttat agaactaacc aaagaccttc tgtcaactca accttctgag
      361 acgcttgcaa gttcagacag ttttgcttct actcaaccta ctcattcatg gaaagtagga
      421 gacaagtgta tggcagtctg gagtgaagat ggacagtgtt atgaagcgga gattgaggag
      481 atagatgaag aaaatggcac cgctgcaatc acctttgctg gttatggcaa tgctgaagtg
      541 actccactgt tgaacctcaa gcctgtagaa gaaggaagga aggcaaagga ggacagtggc
      601 aacaaaccca tgtcaaaaaa agaaatgatt gcccagcagc gtgaatataa aaagaagaaa
      661 gctttgaaaa aagctcagag aataaaagaa cttgagcagg aaagagagga ccagaaagtg
      721 aaatggcaac aattcaacaa cagagcctat tctaaaaaca aaaaaggcca ggtaaagagg
      781 agtatttttg cttcacctga gagtgtgact ggtaaagttg gagtaggaac ctgtggaatt
      841 gctgataaac ctatgacaca atatcaagat acctctaaat acaatgtcag gcatttgatg
      901 cctcaataat cagaaaaact gttggatttc atctctgcag ggctttacat ttaccttttt
      961 atccttatat ttttctaaag gtaaattatt tgttagatga gtaagcaaga taccattgtc
     1021 gtcattggtt ggcttcagta gaatgaaacg tgaagaaatt gcatttgata actgctattc
     1081 atttaacttt tctcattatc agtaccacgg ttccctcaaa gtttgttgaa taaagcaact
     1141 tttgtagatg ctgtttcata cagcacttag atgaattatt gatcttccta atatcaggcg
     1201 cctacttaac ctatggtgtg tactttttgt aagttgtaac ttgaaatttt cagatgcttt
     1261 gaacttgaca catactctag caattcattg gaacaccaag gcaaaaacac caacctgcta
     1321 aaagagatct tttcattttt cttattttca gctttaaaac ttagctgtcg ttcagttaag
     1381 cttaaagata ggttaatttg taaatggcaa agtttgtttt gaggtttttc ctcaataact
     1441 tgtttcccag gcctattagg ccatctctaa aattgatcta gctgttttat ttttatgtac
     1501 tcttagtttt atgtaagaaa ccttaggatg agctcccttt tctaaggtgt ttttgttttt
     1561 tgtatgtttg cttttttcct gttttttgtt ttttccattt acggcagtgg taccatgttt
     1621 tggatgtgtg atgtttatat gggagaacaa aaagctgatg tatagccctg tatacagtgt
     1681 agatactatt tttgtaaaaa cacaaggcta aattaatgaa caagaatact gaatatttca
     1741 tcattaaaaa tttcttgtat ttcttgtgca ttaatctgac gataatttcc ctgtatatta
     1801 tgttcattta gctgtttgta atttttgtta attagatcag gttgtctgca tttgttggtg
     1861 taagtgaaca tcatcacagt tatcctgagt tgagtttaag ccaaatacat gcatagaaaa
     1921 gggtcttcct attaatggaa gaaggtaatt tttaggatgt gtattatttc agttttgtat
     1981 gtttaacttt tattaaataa agtgttttta aaatctccaa aaaaaaaaaa aaa
//